RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PNPLA4P41247 253 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 PIK3CAP42336 1068 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 MYL6P60660 151 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 SHHQ15465 462 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 UPP1Q16831 310 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 C9orf50Q5SZB4 431 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 TC2NQ8N9U0 490 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 FAM71BQ8TC56 605 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 WDR24Q96S15 920 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 GOLGA2P5Q9HBQ8 144 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 SIX2Q9NPC8 291 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 RRP15Q9Y3B9 282 aaKnown RBP13.18□□□□□ -0.3
SCARB1-204ENST00000535005 DAAM1Q9Y4D1 1078 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 INSL6Q9Y581 213 aa13.18□□□□□ -0.3
SCARB1-204ENST00000535005 CARNS1A5YM72 827 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 TMEM189-UBE2V1I3L0A0 370 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 KIF5CO60282 957 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 B4GALT3O60512 393 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 LRRN2O75325 713 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 KRT19P08727 400 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 LMAN1P49257 510 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 WDR44Q5JSH3 913 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 BEND6Q5SZJ8 279 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 SMYD5Q6GMV2 418 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 DCLRE1AQ6PJP8 1040 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 TMCO2Q7Z6W1 182 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 TMEM130Q8N3G9 435 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 RAD9AQ99638 391 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 UBE2OQ9C0C9 1292 aaKnown RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 CWH43Q9H720 699 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 FBXL5Q9UKA1 691 aa13.17□□□□□ -0.3
SCARB1-204ENST00000535005 FNDC1Q4ZHG4 1894 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-204ENST00000535005 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 PODXLO00592 558 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 PPEF2O14830 753 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 FECHP22830 423 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 MAGEA9P43362 315 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 CLCNKBP51801 687 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 MYO1EQ12965 1108 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 KLHDC7AQ5VTJ3 777 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 FAM117BQ6P1L5 589 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 HPDLQ96IR7 371 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 FAM81BQ96LP2 452 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
SCARB1-204ENST00000535005 ZNF560Q96MR9 790 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 NT5C1BQ96P26 610 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 YME1L1Q96TA2 773 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 NUP58Q9BVL2 599 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 LSM14BQ9BX40 385 aaKnown RBP13.16□□□□□ -0.3
SCARB1-204ENST00000535005 EDEM3Q9BZQ6 932 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 IMPG2Q9BZV3 1241 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 TDRD15B5MCY1 1934 aaKnown RBP13.16□□□□□ -0.3
SCARB1-204ENST00000535005 CASTOR2A6NHX0 329 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 VGLL3A8MV65 326 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 NOL4O94818 638 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 ALDH2P05091 517 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 RFX1P22670 979 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.34e-6■■■■■ 30.6
SCARB1-204ENST00000535005 TAF6P49848 677 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 KLK7P49862 253 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 LILRA4P59901 499 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 BTG3Q14201 252 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-204ENST00000535005 ZNF699Q32M78 642 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 PAN2Q504Q3 1202 aaKnown RBP13.16□□□□□ -0.3
SCARB1-204ENST00000535005 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 PHLDB3Q6NSJ2 640 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 CD300LGQ6UXG3 332 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 GANQ9H2C0 597 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
SCARB1-204ENST00000535005 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 APEX2Q9UBZ4 518 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 RSPH14Q9UHP6 348 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
SCARB1-204ENST00000535005 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 AKR1B15C9JRZ8 316 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-204ENST00000535005 GALTP07902 379 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 FAM163BP0C2L3 166 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
SCARB1-204ENST00000535005 SLC11A1P49279 550 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
SCARB1-204ENST00000535005 GCNT1Q02742 428 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 PTPN21Q16825 1174 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 SV2CQ496J9 727 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 ZNF667Q5HYK9 610 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 TATDN2Q93075 761 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms