RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 CYFIP2Q96F07 1278 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 RPGRIP1Q96KN7 1286 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 CXCL16Q9H2A7 254 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 RNF39Q9H2S5 420 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 SMYD3Q9H7B4 428 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 FAM105AQ9NUU6 356 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 KLK14Q9P0G3 267 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 TUBGCP4Q9UGJ1 667 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 PHF24Q9UPV7 400 aa25.36■■□□□ 1.65
PTPMT1-205ENST00000534775 RAP1GAPP47736 663 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 NOMO3P69849 1222 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 RPS6KA1Q15418 735 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 GLRA4Q5JXX5 417 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 CAGE1Q8TC20 777 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 C18orf25Q96B23 403 aaPredicted RBP25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 VCPIP1Q96JH7 1222 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 ZNF560Q96MR9 790 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 SDCBP2Q9H190 292 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 PCDHGC3Q9UN70 934 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 CENPFP49454 3210 aa25.35■■□□□ 1.65
PTPMT1-205ENST00000534775 BUB1BO60566 1050 aaPredicted RBP25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 CILPO75339 1184 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 ITGA4P13612 1032 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 PNPLA4P41247 253 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 CDH8P55286 799 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 C1QTNF8P60827 252 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 C9orf57Q5W0N0 161 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 MCOLN2Q8IZK6 566 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 TMEM130Q8N3G9 435 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 CPA5Q8WXQ8 436 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 ZNF518BQ9C0D4 1074 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 AVENQ9NQS1 362 aaPredicted RBP25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 RNF14Q9UBS8 474 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 CNOT8Q9UFF9 292 aaKnown RBP25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 AMFRQ9UKV5 643 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 PADI3Q9ULW8 664 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 CEP83Q9Y592 693 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 RAB27AP51159 221 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 INCA1Q0VD86 236 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 LIN9Q5TKA1 542 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 C11orf63Q6NUN7 778 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 SH3TC2Q8TF17 1288 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 TSC1Q92574 1164 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 CAPZA3Q96KX2 299 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 MMS19Q96T76 1030 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 AGO3Q9H9G7 860 aaKnown RBP25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 COG5Q9UP83 839 aa25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 V9GYY5 206 aaPredicted RBP25.34■■□□□ 1.65
PTPMT1-205ENST00000534775 FAM170AA1A519 330 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 CES2O00748 559 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 KIF4AO95239 1232 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 GHRP10912 638 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 BRD2P25440 801 aaKnown RBP25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 CD52P31358 61 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 RAD23BP54727 409 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 LPIN1Q14693 890 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 RSRC2Q7L4I2 434 aaKnown RBP25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 PHF13Q86YI8 300 aaPredicted RBP25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 PASD1Q8IV76 773 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 TMEM35BQ8NCS4 154 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 NUP85Q9BW27 656 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 TRAIPQ9BWF2 469 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 ABCB6Q9NP58 842 aa25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 BARX2Q9UMQ3 279 aaPredicted RBP25.33■■□□□ 1.65
PTPMT1-205ENST00000534775 HTTP42858 3142 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 CD19P15391 556 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 C1QBPQ07021 282 aaKnown RBP25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 ERCC6LQ2NKX8 1250 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 CCDC181Q5TID7 509 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 MON1BQ7L1V2 547 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 NT5DC3Q86UY8 548 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 ZNF564Q8TBZ8 553 aaPredicted RBP25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 TMEM176AQ96HP8 235 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 SLC38A7Q9NVC3 462 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 STXBP5LQ9Y2K9 1186 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 PTPN22Q9Y2R2 807 aa25.32■■□□□ 1.64
PTPMT1-205ENST00000534775 ARVCFO00192 962 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 PIRO00625 290 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 ZNF185O15231 689 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 PAFAH1B1P43034 410 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 ZNF618Q5T7W0 954 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 CREG2Q8IUH2 290 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 WHAMMQ8TF30 809 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 COG1Q8WTW3 980 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 ADAM22Q9P0K1 906 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 KIAA1257Q9ULG3 409 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 GIT1Q9Y2X7 761 aa25.31■■□□□ 1.64
PTPMT1-205ENST00000534775 ATMINO43313 823 aaPredicted RBP25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 TFRCP02786 760 aaKnown RBP25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 CFHP08603 1231 aa25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 SKIP12755 728 aa25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 NAA30Q147X3 362 aaPredicted RBP25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 ELF2Q15723 593 aa25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 TEX35Q5T0J7 233 aa25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 MRPL10Q7Z7H8 261 aaKnown RBP25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 SLC4A11Q8NBS3 891 aa25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 RABGGTAQ92696 567 aa25.3■■□□□ 1.64
PTPMT1-205ENST00000534775 PBKQ96KB5 322 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 305.7 ms