RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 TCEAL8Q8IYN2 117 aa13.92□□□□□ -0.18
CCS-209ENST00000534763 TMEM86AQ8N2M4 240 aa13.92□□□□□ -0.18
CCS-209ENST00000534763 OR5B17Q8NGF7 314 aa13.92□□□□□ -0.18
CCS-209ENST00000534763 TMC2Q8TDI7 906 aa13.92□□□□□ -0.18
CCS-209ENST00000534763 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
CCS-209ENST00000534763 ZNF707Q96C28 371 aaPredicted RBP13.92□□□□□ -0.18
CCS-209ENST00000534763 NECAB3Q96P71 396 aaPredicted RBP13.92□□□□□ -0.18
CCS-209ENST00000534763 GZF1Q9H116 711 aaPredicted RBP13.92□□□□□ -0.18
CCS-209ENST00000534763 HSFX1Q9UBD0 423 aa13.92□□□□□ -0.18
CCS-209ENST00000534763 AFF4Q9UHB7 1163 aaKnown RBP13.92□□□□□ -0.18
CCS-209ENST00000534763 SIX4Q9UIU6 781 aa13.92□□□□□ -0.18
CCS-209ENST00000534763 R3HCC1Q9Y3T6 440 aaKnown RBP13.92□□□□□ -0.18
CCS-209ENST00000534763 PTPRJQ12913 1337 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 ANK1P16157 1881 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 BRWD1Q9NSI6 2320 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 WDR27A2RRH5 827 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 IKBKBO14920 756 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 STAU1O95793 577 aaKnown RBP13.91□□□□□ -0.18
CCS-209ENST00000534763 C8AP07357 584 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 FAM163BP0C2L3 166 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 SPATA31D3P0C874 917 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 DLATP10515 647 aaKnown RBP13.91□□□□□ -0.18
CCS-209ENST00000534763 NR2F2P24468 414 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 PRCPP42785 496 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 GPR17Q13304 367 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 PPM1LQ5SGD2 360 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 CENPPQ6IPU0 288 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 SPATA31D4Q6ZUB0 917 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 LIMS2Q7Z4I7 341 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 TMEM130Q8N3G9 435 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 TOP6BLQ8N6T0 577 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 CCDC127Q96BQ5 260 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 MKNK1Q9BUB5 465 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 APOL5Q9BWW9 433 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 POMKQ9H5K3 350 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 WDR6Q9NNW5 1121 aaKnown RBP13.91□□□□□ -0.18
CCS-209ENST00000534763 VWA8A3KMH1 1905 aa13.91□□□□□ -0.18
CCS-209ENST00000534763 HUS1O60921 280 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 XYLBO75191 536 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 RFPL2O75678 378 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 KRT19P08727 400 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 ATICP31939 592 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 ELF1P32519 619 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 LRRC63Q05C16 580 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 ADAM9Q13443 819 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 STIM1Q13586 685 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 INTS8Q75QN2 995 aaKnown RBP13.9□□□□□ -0.18
CCS-209ENST00000534763 ADSSL1Q8N142 457 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 TRIML1Q8N9V2 468 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 SLC7A14Q8TBB6 771 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 SMG7Q92540 1137 aaKnown RBP13.9□□□□□ -0.18
CCS-209ENST00000534763 DHTKD1Q96HY7 919 aaPredicted RBP13.9□□□□□ -0.18
CCS-209ENST00000534763 HPDLQ96IR7 371 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 VRTNQ9H8Y1 702 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 CD320Q9NPF0 282 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 MAPK8IP1Q9UQF2 711 aa13.9□□□□□ -0.18
CCS-209ENST00000534763 TIMM13Q9Y5L4 95 aaPredicted RBP13.9□□□□□ -0.18
CCS-209ENST00000534763 AKAP3O75969 853 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 SSTR3P32745 418 aaPredicted RBP13.89□□□□□ -0.19
CCS-209ENST00000534763 PSMC2P35998 433 aaKnown RBP13.89□□□□□ -0.19
CCS-209ENST00000534763 WSCD1Q658N2 575 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 CEP135Q66GS9 1140 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 LMBRD2Q68DH5 695 aaPredicted RBP13.89□□□□□ -0.19
CCS-209ENST00000534763 OTOP3Q7RTS5 596 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 ZC3H3Q8IXZ2 948 aaKnown RBP13.89□□□□□ -0.19
CCS-209ENST00000534763 ZDHHC14Q8IZN3 488 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 C2orf15Q8WU43 125 aaKnown RBP13.89□□□□□ -0.19
CCS-209ENST00000534763 ZNF516Q92618 1163 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 GBP4Q96PP9 640 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 PIDD1Q9HB75 910 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 AVENQ9NQS1 362 aaPredicted RBP13.89□□□□□ -0.19
CCS-209ENST00000534763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCS-209ENST00000534763 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
CCS-209ENST00000534763 LRRIQ3A6PVS8 624 aaPredicted RBP13.88□□□□□ -0.19
CCS-209ENST00000534763 PRRG1O14668 218 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 GABRDO14764 452 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 PSMA7O14818 248 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 CETN3O15182 167 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
CCS-209ENST00000534763 CPB1P15086 417 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 LHX1P48742 406 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 CASP4P49662 377 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 ARPP19P56211 112 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 FKBP3Q00688 224 aaKnown RBP13.88□□□□□ -0.19
CCS-209ENST00000534763 BFSP1Q12934 665 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 MORC3Q14149 939 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 SMYD4Q8IYR2 804 aaPredicted RBP13.88□□□□□ -0.19
CCS-209ENST00000534763 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
CCS-209ENST00000534763 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
CCS-209ENST00000534763 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 TSG101Q99816 390 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 RTP3Q9BQQ7 232 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 ACBD6Q9BR61 282 aa13.88□□□□□ -0.19
CCS-209ENST00000534763 ZCWPW1Q9H0M4 648 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms