RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 SLC38A8A6NNN8 435 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 RETP07949 1114 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 ALDH1A3P47895 512 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 SOX9P48436 509 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 KPNA1P52294 538 aaPredicted RBP23.19■■□□□ 1.3
SSH3-211ENST00000534112 STXBP5Q5T5C0 1151 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 CENPPQ6IPU0 288 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 C1orf228Q6PIY5 440 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 DSTYKQ6XUX3 929 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 GPIHBP1Q8IV16 184 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 PNMA5Q96PV4 448 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 RBM12Q9NTZ6 932 aaKnown RBP23.19■■□□□ 1.3
SSH3-211ENST00000534112 SLC27A5Q9Y2P5 690 aa23.19■■□□□ 1.3
SSH3-211ENST00000534112 CITO14578 2027 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 LACTBL1A8MY62 500 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 HRO43593 1189 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 TNFSF9P41273 254 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 GUCY2FP51841 1108 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 SLC12A3P55017 1021 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 DMWDQ09019 674 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 SIM2Q14190 667 aaPredicted RBP23.18■■□□□ 1.3
SSH3-211ENST00000534112 LRRC32Q14392 662 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 DNAJB7Q7Z6W7 309 aaPredicted RBP23.18■■□□□ 1.3
SSH3-211ENST00000534112 KCTD17Q8N5Z5 321 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 ATAD1Q8NBU5 361 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 BICD1Q96G01 975 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 LRRC3BQ96PB8 259 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 PLIN2Q99541 437 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 KCND2Q9NZV8 630 aa23.18■■□□□ 1.3
SSH3-211ENST00000534112 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.18■■□□□ 1.3
SSH3-211ENST00000534112 NPHP3-ACAD11A0A0J9YXS1 232 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 CHURC1-FNTBB4DL54 471 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 LRP3O75074 770 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 PLA2G4BP0C869 781 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 TYMPP19971 482 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 FNTBP49356 437 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 PPP2R3AQ06190 1150 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 MYBPC2Q14324 1141 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 WDR44Q5JSH3 913 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 ERICH6BQ5W0A0 696 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 OVOS1Q6IE37 1185 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 GAREM2Q75VX8 874 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 MKNK1Q9BUB5 465 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 ASB3Q9Y575 518 aa23.17■■□□□ 1.3
SSH3-211ENST00000534112 COL4A2P08572 1712 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 MYBPHLA2RUH7 354 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 MTMR11A4FU01 709 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 SPECC1L-ADORA2AF8WAN1 911 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 H0YCG3 227 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 K7ESF4 209 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 PAPSS2O95340 614 aaPredicted RBP23.16■■□□□ 1.3
SSH3-211ENST00000534112 CACNB1Q02641 598 aaPredicted RBP23.16■■□□□ 1.3
SSH3-211ENST00000534112 ENOX2Q16206 610 aaKnown RBP23.16■■□□□ 1.3
SSH3-211ENST00000534112 KYAT1Q16773 422 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 TXNDC11Q6PKC3 985 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 Q6ZS52 159 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 HAUS6Q7Z4H7 955 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 PSMG2Q969U7 264 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 ATXN3LQ9H3M9 355 aa23.16■■□□□ 1.3
SSH3-211ENST00000534112 LARSQ9P2J5 1176 aaKnown RBP23.16■■□□□ 1.3
SSH3-211ENST00000534112 DPYSL4O14531 572 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 PPEF2O14830 753 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 XPOTO43592 962 aaKnown RBP23.15■■□□□ 1.3
SSH3-211ENST00000534112 FAM189A1O60320 539 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 SOAT2O75908 522 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 CTHP32929 405 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 CNR2P34972 360 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 NCKAP1LP55160 1127 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 LILRA4P59901 499 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 ATP2C1P98194 919 aaPredicted RBP23.15■■□□□ 1.3
SSH3-211ENST00000534112 SRSF5Q13243 272 aaKnown RBP23.15■■□□□ 1.3
SSH3-211ENST00000534112 ARSHQ5FYA8 562 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 DGKKQ5KSL6 1271 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 ARMCX5Q6P1M9 558 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 LONP2Q86WA8 852 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 RALGPS2Q86X27 583 aaPredicted RBP23.15■■□□□ 1.3
SSH3-211ENST00000534112 TTC9BQ8N6N2 239 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 TTC8Q8TAM2 541 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 NETO1Q8TDF5 533 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 KCNN1Q92952 543 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 ZFYVE19Q96K21 471 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 TSPAN18Q96SJ8 248 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 TMEM209Q96SK2 561 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 RPF1Q9H9Y2 349 aaKnown RBP23.15■■□□□ 1.3
SSH3-211ENST00000534112 SEMA4GQ9NTN9 838 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 GTSE1Q9NYZ3 720 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 TICRRQ7Z2Z1 1910 aa23.15■■□□□ 1.3
SSH3-211ENST00000534112 SLC30A4O14863 429 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 FGF19O95750 216 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 ADRB2P07550 413 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 LIG4P49917 911 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 ARHGAP29Q52LW3 1261 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 GPR158Q5T848 1215 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 SPATA1Q5VX52 437 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 HEATR6Q6AI08 1181 aaKnown RBP23.14■■□□□ 1.29
SSH3-211ENST00000534112 FAM200AQ8TCP9 573 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 CDK5RAP3Q96JB5 506 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 SENP8Q96LD8 212 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 C2orf42Q9NWW7 574 aa23.14■■□□□ 1.29
SSH3-211ENST00000534112 PPP4R2Q9NY27 417 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms