RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 NCBP1Q09161 790 aaKnown RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 HNRNPDQ14103 355 aaKnown RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 DMC1Q14565 340 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 ITPRIPL2Q3MIP1 535 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 SLC8B1Q6J4K2 584 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 ANKS3Q6ZW76 656 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 ANO5Q75V66 913 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 SYT13Q7L8C5 426 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 MIER3Q7Z3K6 550 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 PLEKHM2Q8IWE5 1019 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 MB21D2Q8IYB1 491 aaPredicted RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 TCEAL8Q8IYN2 117 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 LEMD2Q8NC56 503 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 LSM14AQ8ND56 463 aaKnown RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 RDM1Q8NG50 284 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 ZNF461Q8TAF7 563 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 LRRC3BQ96PB8 259 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 GTPBP2Q9BX10 602 aaKnown RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 TEKT3Q9BXF9 490 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 GPR88Q9GZN0 384 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 GLT8D2Q9H1C3 349 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 IL25Q9H293 177 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 CEP72Q9P209 647 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 MBD1Q9UIS9 605 aaPredicted RBP7.15□□□□□ -1.26
CD44-237ENST00000534082 WASF2Q9Y6W5 498 aa7.15□□□□□ -1.26
CD44-237ENST00000534082 TEX15Q9BXT5 2789 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 TMEM189-UBE2V1I3L0A0 370 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 hCG_1984214I3L0E3 225 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 CCER2I3L3R5 266 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 I3L4J1 428 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 INO80B-WBP1J3KQ70 363 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 PTGESO14684 152 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 MSH4O15457 936 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 OPHN1O60890 802 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ABLIM3O94929 683 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 CFIP05156 583 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ATF2P15336 505 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ARF4P18085 180 aaPredicted RBP7.14□□□□□ -1.27
CD44-237ENST00000534082 ARPP19P56211 112 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 TWF1Q12792 350 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ATMQ13315 3056 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 PCBP1Q15365 356 aaKnown RBP eCLIP7.14□□□□□ -1.27
CD44-237ENST00000534082 NAB2Q15742 525 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 MAPK6Q16659 721 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 USP39Q53GS9 565 aaKnown RBP7.14□□□□□ -1.27
CD44-237ENST00000534082 STXBP5Q5T5C0 1151 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 LRCH2Q5VUJ6 765 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 SLC27A1Q6PCB7 646 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 CASC1Q6TDU7 716 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ARMCX6Q7L4S7 300 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 CDR2LQ86X02 465 aaPredicted RBP7.14□□□□□ -1.27
CD44-237ENST00000534082 ARID3BQ8IVW6 561 aaPredicted RBP7.14□□□□□ -1.27
CD44-237ENST00000534082 ZNF713Q8N859 430 aaPredicted RBP7.14□□□□□ -1.27
CD44-237ENST00000534082 TSTD1Q8NFU3 115 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 RPLP0P6Q8NHW5 317 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 SLC5A5Q92911 643 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 GJA10Q969M2 543 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ACDQ96AP0 544 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ZNF512Q96ME7 567 aaPredicted RBP7.14□□□□□ -1.27
CD44-237ENST00000534082 CAMK1GQ96NX5 476 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 RIT2Q99578 217 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ATXN2Q99700 1313 aaKnown RBP7.14□□□□□ -1.27
CD44-237ENST00000534082 FSCN3Q9NQT6 498 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 BARHL2Q9NY43 387 aa7.14□□□□□ -1.27
CD44-237ENST00000534082 ABCA7Q8IZY2 2146 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 PLXNB3Q9ULL4 1909 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 PYCARD-AS1I3L0S3 204 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 SH2B2O14492 632 aaPredicted RBP7.13□□□□□ -1.27
CD44-237ENST00000534082 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
CD44-237ENST00000534082 TNFRSF10BO14763 440 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 CAPN9O14815 690 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 B4GALT5O43286 388 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 PRC1O43663 620 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 B3GAT3O94766 335 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 PRAMEF12O95522 483 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 THP07101 528 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 CD59P13987 128 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 DRD1P21728 446 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 IGFBP6P24592 240 aaPredicted RBP7.13□□□□□ -1.27
CD44-237ENST00000534082 CIITAP33076 1130 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 RFC5P40937 340 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 MCM2P49736 904 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 NPEPPSP55786 919 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 MBTD1Q05BQ5 628 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 SRSF1Q07955 248 aaKnown RBP eCLIP7.13□□□□□ -1.27
CD44-237ENST00000534082 CYP4F3Q08477 520 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 PTPAQ15257 358 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 TRIP6Q15654 476 aaKnown RBP7.13□□□□□ -1.27
CD44-237ENST00000534082 DESI1Q6ICB0 168 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 ANO7Q6IWH7 933 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 SLC23A3Q6PIS1 610 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 FERMT3Q86UX7 667 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 MICU3Q86XE3 530 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 TMC8Q8IU68 726 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 SYT12Q8IV01 421 aa7.13□□□□□ -1.27
CD44-237ENST00000534082 MINDY1Q8N5J2 469 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms