RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 DMAC2Q9NW81 257 aa17.07■□□□□ 0.32
TSKU-204ENST00000533752 AGAP1Q9UPQ3 857 aa17.07■□□□□ 0.32
TSKU-204ENST00000533752 MTCL1Q9Y4B5 1905 aaKnown RBP17.06■□□□□ 0.32
TSKU-204ENST00000533752 CLUHO75153 1309 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 PRRG1O14668 218 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 KRT19P08727 400 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 ATF2P15336 505 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 TNNI1P19237 187 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 AP3M2P53677 418 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 ARPP19P56211 112 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 UBE2HP62256 183 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 OTOP3Q7RTS5 596 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 TCEAL8Q8IYN2 117 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 RDH13Q8NBN7 331 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 SPATA18Q8TC71 538 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 CCDC127Q96BQ5 260 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 ZNF707Q96C28 371 aaPredicted RBP17.06■□□□□ 0.32
TSKU-204ENST00000533752 ACSF2Q96CM8 615 aaPredicted RBP17.06■□□□□ 0.32
TSKU-204ENST00000533752 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 WDR6Q9NNW5 1121 aaKnown RBP17.06■□□□□ 0.32
TSKU-204ENST00000533752 TSHZ2Q9NRE2 1034 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 AFF4Q9UHB7 1163 aaKnown RBP17.06■□□□□ 0.32
TSKU-204ENST00000533752 CDH22Q9UJ99 828 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 FRMD4BQ9Y2L6 1034 aa17.06■□□□□ 0.32
TSKU-204ENST00000533752 TIMM13Q9Y5L4 95 aaPredicted RBP17.06■□□□□ 0.32
TSKU-204ENST00000533752 PTPRJQ12913 1337 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 MAPK13O15264 365 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 ALADP13716 330 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 RPL13P26373 211 aaKnown RBP17.05■□□□□ 0.32
TSKU-204ENST00000533752 BFSP1Q12934 665 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 COBLL1Q53SF7 1204 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 ZNF658Q5TYW1 1059 aaPredicted RBP17.05■□□□□ 0.32
TSKU-204ENST00000533752 LMBRD2Q68DH5 695 aaPredicted RBP17.05■□□□□ 0.32
TSKU-204ENST00000533752 THEM5Q8N1Q8 247 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 OR5B17Q8NGF7 314 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 SPATA20Q8TB22 786 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 GDAP2Q9NXN4 497 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 SIX4Q9UIU6 781 aa17.05■□□□□ 0.32
TSKU-204ENST00000533752 SCN1AP35498 2009 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 DENND4AQ7Z401 1863 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 DCXO43602 365 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 HUS1O60921 280 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
TSKU-204ENST00000533752 LRG1P02750 347 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 NR2F2P24468 414 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 EDRF1Q3B7T1 1238 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 TRAPPC11Q7Z392 1133 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 RNF135Q8IUD6 432 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 ZDHHC14Q8IZN3 488 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 TMEM86AQ8N2M4 240 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 CXorf38Q8TB03 319 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 PCDHA5Q9Y5H7 936 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 TSC2P49815 1807 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 C5orf42Q9H799 3197 aa17.04■□□□□ 0.32
TSKU-204ENST00000533752 C2CD4DB7Z1M9 353 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 SP100P23497 879 aaPredicted RBP17.03■□□□□ 0.32
TSKU-204ENST00000533752 PPP1R2P41236 205 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 SMARCB1Q12824 385 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 GPR17Q13304 367 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 PLD1Q13393 1074 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 STIM1Q13586 685 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 WSCD1Q658N2 575 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 CEP135Q66GS9 1140 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 ELMOD1Q8N336 334 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 TOP6BLQ8N6T0 577 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 TMC2Q8TDI7 906 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 BORCS6Q96GS4 357 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 HPDLQ96IR7 371 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 TSG101Q99816 390 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 HSFX1Q9UBD0 423 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 POLIQ9UNA4 740 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 INSL5Q9Y5Q6 135 aa17.03■□□□□ 0.32
TSKU-204ENST00000533752 C2orf16Q68DN1 1984 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 PI4K2BG5E9Z4 385 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 CCL16O15467 120 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 CLDN10P78369 228 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 TSPY1Q01534 308 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 ENPEPQ07075 957 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 TRPC3Q13507 836 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 ZCWPW2Q504Y3 356 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 INTS8Q75QN2 995 aaKnown RBP17.02■□□□□ 0.32
TSKU-204ENST00000533752 DPH6Q7L8W6 267 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 SMYD4Q8IYR2 804 aaPredicted RBP17.02■□□□□ 0.32
TSKU-204ENST00000533752 PDCL2Q8N4E4 241 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 PARD3BQ8TEW8 1205 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 C2orf15Q8WU43 125 aaKnown RBP17.02■□□□□ 0.32
TSKU-204ENST00000533752 C1QTNF1Q9BXJ1 281 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.02■□□□□ 0.324e-6■■□□□ 12.1
TSKU-204ENST00000533752 SNX9Q9Y5X1 595 aa17.02■□□□□ 0.32
TSKU-204ENST00000533752 PHACTR2O75167 634 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 STAU1O95793 577 aaKnown RBP17.01■□□□□ 0.31
TSKU-204ENST00000533752 KRT13P13646 458 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 ATICP31939 592 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 MYL7Q01449 175 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 BIRC3Q13489 604 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms