RNA–Protein interactions for RNA: ENST00000533557.5

BBS1-222, Transcript of Bardet-Biedl syndrome 1, human

TSL 2

Gene BBS1, Length 1,043 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-222	ENST00000533557	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	BCLAF3	A2AJT9	711 aa	Known RBP	13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	SOBP	A7XYQ1	873 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	CDC45	O75419	566 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	CAVIN2	O95810	425 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	EGF	P01133	1207 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	KCNE1	P15382	129 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	CALCRL	Q16602	461 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	ECM1	Q16610	540 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	ARHGAP29	Q52LW3	1261 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	C1orf228	Q6PIY5	440 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	ATAD1	Q8NBU5	361 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	DEPTOR	Q8TB45	409 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	CCDC43	Q96MW1	224 aa	Known RBP	13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	GKN1	Q9NS71	199 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	TNFSF13B	Q9Y275	285 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	SMG1	Q96Q15	3661 aa	Known RBP	13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	ITPR1	Q14643	2758 aa		13.3	□□□□□ -0.28
BBS1-222	ENST00000533557	CAPNS1	P04632	268 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	FDPS	P14324	419 aa	Known RBP	13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	CPB1	P15086	417 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	U2AF2	P26368	475 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	CYP4F8	P98187	520 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	CREB5	Q02930	508 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	SEZ6	Q53EL9	994 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	GPR158	Q5T848	1215 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	TRIM68	Q6AZZ1	485 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	CENPP	Q6IPU0	288 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	ZNF280D	Q6N043	979 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	KIAA1211L	Q6NV74	962 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	ZBTB45	Q96K62	511 aa	Predicted RBP	13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	ACO2	Q99798	780 aa	Known RBP	13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	FAM83C	Q9BQN1	747 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	SLC46A2	Q9BY10	475 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	ATXN3L	Q9H3M9	355 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	IL21	Q9HBE4	155 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	TUBGCP4	Q9UGJ1	667 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	NUB1	Q9Y5A7	615 aa		13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	ASCC3	Q8N3C0	2202 aa	Known RBP	13.29	□□□□□ -0.28
BBS1-222	ENST00000533557	TRDMT1	O14717	391 aa	Known RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	HYAL3	O43820	417 aa	Predicted RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	RNF40	O75150	1001 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	AKAP3	O75969	853 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	OAZ2	O95190	189 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	ZIC2	O95409	532 aa	Predicted RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	RPL9	P32969	192 aa	Known RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	MCM4	P33991	863 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	SLC10A6	Q3KNW5	377 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	ITPRIPL2	Q3MIP1	535 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	DEFB124	Q8NES8	71 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	FAM200A	Q8TCP9	573 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	BPIFB1	Q8TDL5	484 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	YTHDC1	Q96MU7	727 aa	Known RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	NAP1L4	Q99733	375 aa	Known RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	TARS2	Q9BW92	718 aa	Known RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	CNTN3	Q9P232	1028 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	KLK13	Q9UKR3	277 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	MAFF	Q9ULX9	164 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	PCDHB8	Q9UN66	801 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	SLC8A2	Q9UPR5	921 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	CCL26	Q9Y258	94 aa		13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	FLNB	O75369	2602 aa	Known RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	GCN1	Q92616	2671 aa	Known RBP	13.28	□□□□□ -0.28
BBS1-222	ENST00000533557	PCNX2	A6NKB5	2137 aa		13.27	□□□□□ -0.28
BBS1-222	ENST00000533557		M0QZQ0	153 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	CEACAM1	P13688	526 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	ARSA	P15289	507 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	CSRP1	P21291	193 aa	Known RBP	13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	PROZ	P22891	400 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	PSMA5	P28066	241 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	GABRR2	P28476	465 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	GALK1	P51570	392 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	IRX4	P78413	519 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	SPAG1	Q07617	926 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	DAW1	Q8N136	415 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	CAMKK1	Q8N5S9	505 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	NACC1	Q96RE7	527 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	LPIN3	Q9BQK8	851 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	CCDC94	Q9BW85	323 aa	Predicted RBP	13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	EBF3	Q9H4W6	596 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	TUFT1	Q9NNX1	390 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	SLC38A7	Q9NVC3	462 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	OBP2A	Q9NY56	170 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	GON4L	Q3T8J9	2241 aa		13.27	□□□□□ -0.29
BBS1-222	ENST00000533557	MTMR11	A4FU01	709 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	TMEM8B	A6NDV4	472 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	BTBD18	B2RXH4	712 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557		K7ERI5	159 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	LOC400499	M0QZD8	3231 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	DPYSL4	O14531	572 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	PPEF2	O14830	753 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	BCKDHB	P21953	392 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	WEE1	P30291	646 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	GUCY2F	P51841	1108 aa		13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	YARS	P54577	528 aa	Known RBP	13.26	□□□□□ -0.29
BBS1-222	ENST00000533557	EPHB3	P54753	998 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms