RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 DRG1Q9Y295 367 aaKnown RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 SIP14410 1827 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 ALOX15BO15296 676 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 EXTL3O43909 919 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 TYROBPO43914 113 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 PEX11AO75192 247 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 LUC7L3O95232 432 aaKnown RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 C4BPAP04003 597 aaKnown RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 CHRM1P11229 460 aaPredicted RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 PECAM1P16284 738 aaPredicted RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 GLIS1Q8NBF1 620 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 FEZF2Q8TBJ5 459 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 LRRC8CQ8TDW0 803 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 SH3TC2Q8TF17 1288 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 SPOCK2Q92563 424 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 SLITRK1Q96PX8 696 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 TAAR1Q96RJ0 339 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 CYLDQ9NQC7 956 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 IP6K2Q9UHH9 426 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 TCEAL9Q9UHQ7 104 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 DNPEPQ9ULA0 475 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 RPL26L1Q9UNX3 145 aaKnown RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 CLRN2A0PK11 232 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 TRAFD1O14545 582 aaPredicted RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 TLR3O15455 904 aaKnown RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 SMNDC1O75940 238 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTSB-228ENST00000533455 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 CFHP08603 1231 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 MMP10P09238 476 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
CTSB-228ENST00000533455 PTPN7P35236 360 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 TAS1R3Q7RTX0 852 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 FAM84AQ96KN4 292 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 SENP7Q9BQF6 1050 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 SLCO1B3Q9NPD5 702 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 SHOC2Q9UQ13 582 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 CNTN6Q9UQ52 1028 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 USTQ9Y2C2 406 aa17.57■□□□□ 0.4
CTSB-228ENST00000533455 YDJCA8MPS7 323 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 POC1B-GALNT4F8VUJ3 575 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 TJP3O95049 919 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 T-ENOLP0DO92 83 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 KRT15P19012 456 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 CALB2P22676 271 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 TARSP26639 723 aaKnown RBP17.56■□□□□ 0.4
CTSB-228ENST00000533455 RPA3P35244 121 aaPredicted RBP17.56■□□□□ 0.4
CTSB-228ENST00000533455 GJC1P36383 396 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 PIK3CAP42336 1068 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 ARSEP51690 589 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 CUL2Q13617 745 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 BLMHQ13867 455 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 CMPK2Q5EBM0 449 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 RNASEH2BQ5TBB1 312 aaKnown RBP17.56■□□□□ 0.4
CTSB-228ENST00000533455 LRRC38Q5VT99 294 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 TDRD10Q5VZ19 366 aaKnown RBP17.56■□□□□ 0.4
CTSB-228ENST00000533455 ZNF398Q8TD17 642 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 SLC7A6OSQ96CW6 309 aaPredicted RBP17.56■□□□□ 0.4
CTSB-228ENST00000533455 KIF9Q9HAQ2 790 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 PDLIM7Q9NR12 457 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 PARVAQ9NVD7 372 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 CYP39A1Q9NYL5 469 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 FETUBQ9UGM5 382 aa17.56■□□□□ 0.4
CTSB-228ENST00000533455 ZBED4O75132 1171 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 STBD1O95210 358 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 GNA15P30679 374 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 ABCD1P33897 745 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 FASTKD3Q14CZ7 662 aaKnown RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 SLC1A5Q15758 541 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 EFHC2Q5JST6 749 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 WASHC2DQ5SRD0 308 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 TRMT1LQ7Z2T5 733 aaKnown RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 PASD1Q8IV76 773 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 ENDOVQ8N8Q3 282 aaKnown RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 FAM13CQ8NE31 585 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 PHACTR1Q9C0D0 580 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 KIAA1683Q9H0B3 1180 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 ARHGAP28Q9P2N2 729 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 PSMC3IPQ9P2W1 217 aaPredicted RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 NKX1-2Q9UD57 310 aaPredicted RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 HAO1Q9UJM8 370 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 ZNF148Q9UQR1 794 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 H0YCG3 227 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 VNN1O95497 513 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 ZSCAN5DPP0CG00 497 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 CA4P22748 312 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 SSR1P43307 286 aaKnown RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 RASSF2P50749 326 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 VCPP55072 806 aaKnown RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 SOX10P56693 466 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 GPS1Q13098 491 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 TAF11Q15544 211 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 OASLQ15646 514 aaKnown RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 SLC45A4Q5BKX6 768 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 ZC3H12AQ5D1E8 599 aaKnown RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 C4orf33Q8N1A6 199 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 MCPH1Q8NEM0 835 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 STK32AQ8WU08 396 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms