RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 DDX20Q9UHI6 824 aaKnown RBP16.28■□□□□ 0.2
CACNA1E-208ENST00000533229 SCINQ9Y6U3 715 aa16.28■□□□□ 0.2
CACNA1E-208ENST00000533229 TMEM191CA6NGB0 347 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 PI4K2BG5E9Z4 385 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 MEFVO15553 781 aaPredicted RBP16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 ACSL3O95573 720 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 TMEM191BP0C7N4 346 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 CHN1P15882 459 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 TFAMQ00059 246 aaKnown RBP16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 OGDHQ02218 1023 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 GRM1Q13255 1194 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 DUOXA2Q1HG44 320 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 ERMARDQ5T6L9 678 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 FBXO16Q8IX29 292 aaPredicted RBP16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 THNSL1Q8IYQ7 743 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 FAM167AQ96KS9 214 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 FAM129AQ9BZQ8 928 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 CNOT10Q9H9A5 744 aaKnown RBP16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 PTPRHQ9HD43 1115 aa16.27■□□□□ 0.2
CACNA1E-208ENST00000533229 A0A0G2JMZ2 1700 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 F8VP50 259 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 NOP56O00567 594 aaKnown RBP16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 RASGRF2O14827 1237 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 KRT10P13645 584 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 PROZP22891 400 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 ADCY8P40145 1251 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 AP3M2P53677 418 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 MXD4Q14582 209 aaPredicted RBP16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 CCNG2Q16589 344 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 LONRF1Q17RB8 773 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 TXNRD3NBQ6F5E7 133 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 C6orf89Q6UWU4 347 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 SCARA5Q6ZMJ2 495 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 PACS2Q86VP3 889 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 TMEM192Q8IY95 271 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 EXD1Q8NHP7 514 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 NIF3L1Q9GZT8 377 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 MINDY3Q9H8M7 445 aa16.27■□□□□ 0.19
CACNA1E-208ENST00000533229 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 ITGBL1O95965 494 aaPredicted RBP16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 GAS8O95995 478 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 AGTP01019 485 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 ASPAP45381 313 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 CCDC38Q502W7 563 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 EEF1DP3Q658K8 133 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 GPAT2Q6NUI2 795 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 SYDE1Q6ZW31 735 aaPredicted RBP16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 TRMT10CQ7L0Y3 403 aaKnown RBP16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 SULF1Q8IWU6 871 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 GRK7Q8WTQ7 553 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 DCPSQ96C86 337 aaKnown RBP16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 NLRP4Q96MN2 994 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 MCEEQ96PE7 176 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 XPO6Q96QU8 1125 aaKnown RBP16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 SELENOSQ9BQE4 189 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 PDGFCQ9NRA1 345 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 IVNS1ABPQ9Y6Y0 642 aa16.26■□□□□ 0.19
CACNA1E-208ENST00000533229 DNAJC25-GNG10A0A024R161 153 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 MAN1A1P33908 653 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 NFX1Q12986 1120 aaKnown RBP16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 IFT88Q13099 833 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 KYNUQ16719 465 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 CCDC62Q6P9F0 684 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 TSHZ1Q6ZSZ6 1077 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 ZBTB8OSQ8IWT0 167 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 MICALL1Q8N3F8 863 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 TCP11Q8WWU5 503 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 PPM1EQ8WY54 764 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 SCLT1Q96NL6 688 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 FZD8Q9H461 694 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 ADARB2Q9NS39 739 aaKnown RBP16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 IP6K2Q9UHH9 426 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 C5orf60A6NFR6 353 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 ATF2P15336 505 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 CLCN3P51790 818 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 PPP1R15BQ5SWA1 713 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 KAZNQ674X7 775 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 MFSD7Q6UXD7 560 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 SPATS2Q86XZ4 545 aaKnown RBP16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 DHX37Q8IY37 1157 aaKnown RBP16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 GLIS1Q8NBF1 620 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 CENPTQ96BT3 561 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 ACSF2Q96CM8 615 aaPredicted RBP16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 TRAIPQ9BWF2 469 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 ANAPC5Q9UJX4 755 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 ATXN2Q99700 1313 aaKnown RBP16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 PTPRFP10586 1907 aa16.25■□□□□ 0.19
CACNA1E-208ENST00000533229 FOXO6A8MYZ6 492 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 INO80B-WBP1J3KQ70 363 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 ACKR2O00590 384 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 CSDE1O75534 798 aaKnown RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 TTC4O95801 387 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 DRD4P21917 467 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms