RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CEP135Q66GS9 1140 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 TPGS2Q68CL5 300 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 ZNF280DQ6N043 979 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 BMP8AQ7Z5Y6 402 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 BRSK2Q8IWQ3 736 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 XXYLT1Q8NBI6 393 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 NELFBQ8WX92 580 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 DHTKD1Q96HY7 919 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 KIAA1586Q9HCI6 787 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 FBXL5Q9UKA1 691 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 FRMD4BQ9Y2L6 1034 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 VWA8A3KMH1 1905 aa13.98□□□□□ -0.17
TRAPPC4-212ENST00000533058 CLUHO75153 1309 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 BICDL2A1A5D9 508 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 ARHGEF37A1IGU5 675 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 PPP1R3GB7ZBB8 358 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 NR2F2P24468 414 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 CCNE1P24864 410 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 STX17P56962 302 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 PAK1Q13153 545 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 C9orf57Q5W0N0 161 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 TRIM67Q6ZTA4 783 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 TCEAL8Q8IYN2 117 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 MLKLQ8NB16 471 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 ZSWIM2Q8NEG5 633 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 PIDD1Q9HB75 910 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 RBAKQ9NYW8 714 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 SORCS3Q9UPU3 1222 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 ARIH1Q9Y4X5 557 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 ZFP37Q9Y6Q3 630 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 MTCL1Q9Y4B5 1905 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-212ENST00000533058 PLXNA3P51805 1871 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 PDCD11Q14690 1871 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 WDR27A2RRH5 827 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 CETN3O15182 167 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 XYLBO75191 536 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 LETM1O95202 739 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 YWHAHQ04917 246 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 SIGLEC14Q08ET2 396 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 ADAM9Q13443 819 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 SNRNP35Q16560 246 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 CTXN3Q4LDR2 81 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 ANKRD40Q6AI12 368 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 CBWD2Q8IUF1 395 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 SLC7A14Q8TBB6 771 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 NXPE3Q969Y0 559 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 ANO10Q9NW15 660 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 DPP3Q9NY33 737 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 IGSF9Q9P2J2 1179 aa13.96□□□□□ -0.17
TRAPPC4-212ENST00000533058 TRIM49BA6NDI0 452 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 OR6C75A6NL08 312 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 PPEF2O14830 753 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 N4BP1O75113 896 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 CYP11A1P05108 521 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 COL9A1P20849 921 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 SP100P23497 879 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 ELF1P32519 619 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 GUCY2FP51841 1108 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 MTMR3Q13615 1198 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 MYBPC2Q14324 1141 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 SURF1Q15526 300 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 STX1AQ16623 288 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 EDRF1Q3B7T1 1238 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 DPCR1Q3MIW9 517 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 CENPPQ6IPU0 288 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 RBM43Q6ZSC3 357 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 USP37Q86T82 979 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 SLC9A9Q8IVB4 645 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 CACTINQ8WUQ7 758 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 TMEM174Q8WUU8 243 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 EEF2KMTQ96G04 330 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 SENP8Q96LD8 212 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 AVENQ9NQS1 362 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 AFF4Q9UHB7 1163 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 DSEQ9UL01 958 aa13.95□□□□□ -0.18
TRAPPC4-212ENST00000533058 FAM86C2PA6NEL3 165 aa13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 SPTLC1O15269 473 aa13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 DLATP10515 647 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 EPB41P11171 864 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 ODC1P11926 461 aa13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 PNPLA4P41247 253 aa13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 CASP4P49662 377 aa13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 TAF6P49848 677 aa13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 PMS1P54277 932 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 TFAMQ00059 246 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-212ENST00000533058 FKBP3Q00688 224 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms