RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 LTKP29376 864 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 SERPINB3P29508 390 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 CLK1P49759 484 aaKnown RBP7.95□□□□□ -1.14
CTNND1-233ENST00000532787 COPAP53621 1224 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 LAMC2Q13753 1193 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 SYTL3Q4VX76 610 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 RINLQ6ZS11 566 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 NLRP9Q7RTR0 991 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 P3H2Q8IVL5 708 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 SUGP1Q8IWZ8 645 aaKnown RBP7.95□□□□□ -1.14
CTNND1-233ENST00000532787 DDHD1Q8NEL9 900 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 GTF3C2Q8WUA4 911 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-233ENST00000532787 TMA16Q96EY4 203 aaKnown RBP7.95□□□□□ -1.14
CTNND1-233ENST00000532787 MAGEB18Q96M61 343 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 ERGIC2Q96RQ1 377 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 CARD9Q9H257 536 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 TASP1Q9H6P5 420 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 RAVER2Q9HCJ3 691 aaKnown RBP7.95□□□□□ -1.14
CTNND1-233ENST00000532787 TMEM161AQ9NX61 479 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 TMEM260Q9NX78 707 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 METP08581 1390 aa7.95□□□□□ -1.14
CTNND1-233ENST00000532787 BNIP3LO60238 219 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 IRAK1P51617 712 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 LONRF1Q17RB8 773 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 WDR93Q6P2C0 686 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 EEPD1Q7L9B9 569 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 RNF135Q8IUD6 432 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 RIN3Q8TB24 985 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 MMP19Q99542 508 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SH3GL1Q99961 368 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 THTPAQ9BU02 230 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SPATA16Q9BXB7 569 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 GOLPH3Q9H4A6 298 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 DCDC2Q9UHG0 476 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SAC3D1A6NKF1 404 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 KIF28PB7ZC32 967 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 GLRA3O75311 464 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 THRAP10827 490 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 FCER1AP12319 257 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 VCAM1P19320 739 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 STIP1P31948 543 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SOX6P35712 828 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 RAB14P61106 215 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 NFX1Q12986 1120 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 THEMIS2Q5TEJ8 643 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 ZNF772Q68DY9 489 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 APPL2Q8NEU8 664 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 RAB6BQ9NRW1 208 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 MBD5Q9P267 1494 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 TET3O43151 1660 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 EEF2KO00418 725 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 MAGEB2O15479 319 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SEC24DO94855 1032 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 TRIM49P0CI25 452 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 TRIM49CP0CI26 452 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 FCGR1AP12314 374 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 PSMA4P25789 261 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 CASP1P29466 404 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 MRPL48Q96GC5 212 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 ZIM3Q96PE6 472 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 KCNF1Q9H3M0 494 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SLC38A7Q9NVC3 462 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 NMRK1Q9NWW6 199 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 UBAP1Q9NZ09 502 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 LSM7Q9UK45 103 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 TMEM94Q12767 1356 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 NBPF26B4DH59 902 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 MAFGO15525 162 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 RAD51CO43502 376 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 USP1O94782 785 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 CYP2D6P10635 497 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 EFHC1Q5JVL4 640 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 PRPF39Q86UA1 669 aaKnown RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SPATA2LQ8IUW3 424 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 NBPF15Q8N660 670 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SHCBP1Q8NEM2 672 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 USP13Q92995 863 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 ZFYVE19Q96K21 471 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 COQ7Q99807 217 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 ISCA1Q9BUE6 129 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 JPH1Q9HDC5 661 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 C20orf96Q9NUD7 363 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-233ENST00000532787 SLC30A1Q9Y6M5 507 aa7.94□□□□□ -1.14
CTNND1-233ENST00000532787 PHF20L1A8MW92 1017 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 F5H6K3 240 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 TDP2O95551 362 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 IGKV5-2P06315 115 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 PDGFRAP16234 1089 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 MAPK1P28482 360 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 COILP38432 576 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-233ENST00000532787 SESN2P58004 480 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-233ENST00000532787 KLRC3Q07444 240 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 TRIM28Q13263 835 aaKnown RBP7.93□□□□□ -1.14
CTNND1-233ENST00000532787 TC2NQ8N9U0 490 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 RBBP8NLQ8NC74 664 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-233ENST00000532787 PIGBQ92521 554 aa7.93□□□□□ -1.14
CTNND1-233ENST00000532787 DDX17Q92841 729 aaKnown RBP7.93□□□□□ -1.14
CTNND1-233ENST00000532787 TRIM51Q9BSJ1 452 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms