RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 BPTFQ12830 3046 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 PCNX2A6NKB5 2137 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 C4orf47A7E2U8 309 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 PATE3B3GLJ2 98 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 ABLIM1O14639 778 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 CHADO15335 359 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 JAK2O60674 1132 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 PAPSS2O95340 614 aaPredicted RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 SEC24BO95487 1268 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 EGFP01133 1207 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 CCDC192P0DO97 292 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 MPLP40238 635 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 GRM5P41594 1212 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 NOVA1P51513 510 aaKnown RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 FCHO2Q0JRZ9 810 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 NBR1Q14596 966 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 XKR4Q5GH76 650 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 PLA2G2CQ5R387 149 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 GPR158Q5T848 1215 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 ZNF280DQ6N043 979 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 DAW1Q8N136 415 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 ATAD1Q8NBU5 361 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 GAB3Q8WWW8 586 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 SUSD3Q96L08 255 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 IER2Q9BTL4 223 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 POLR3CQ9BUI4 534 aaPredicted RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 LSM14BQ9BX40 385 aaKnown RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 TMEM121BQ9BXQ6 578 aaPredicted RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 HAPLN2Q9GZV7 340 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 PTPRHQ9HD43 1115 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 AFF4Q9UHB7 1163 aaKnown RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 WASF3Q9UPY6 502 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 CCL26Q9Y258 94 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 CEP192Q8TEP8 1941 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 CELSR3Q9NYQ7 3312 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 TNRC6BQ9UPQ9 1833 aaKnown RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 LOC400499M0QZD8 3231 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 SMG1Q96Q15 3661 aaKnown RBP9.81□□□□□ -0.84
USF1-210ENST00000531842 STK36Q9NRP7 1315 aa9.81□□□□□ -0.84
USF1-210ENST00000531842 ANAPC1Q9H1A4 1944 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 IGSF10Q6WRI0 2623 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 CCDC169A6NNP5 214 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 SFI1A8K8P3 1242 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 H7C4K7 107 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 SYN3O14994 580 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 CDKL5O76039 1030 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 MICAL2O94851 1124 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 CENPBP07199 599 aaPredicted RBP9.8□□□□□ -0.84
USF1-210ENST00000531842 ARSAP15289 507 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 XBP1P17861 261 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 GABRR2P28476 465 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 NMT1P30419 496 aaKnown RBP9.8□□□□□ -0.84
USF1-210ENST00000531842 CNR2P34972 360 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 LIMK1P53667 647 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 PEX3P56589 373 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 ZNF252P-AS1Q0IIN9 211 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 ZNF174Q15697 407 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 SLC10A6Q3KNW5 377 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 TPGS2Q68CL5 300 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 RTL10Q7L3V2 364 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 CACNA2D4Q7Z3S7 1137 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 DIS3L2Q8IYB7 885 aaKnown RBP9.8□□□□□ -0.84
USF1-210ENST00000531842 FAM200AQ8TCP9 573 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 NACC1Q96RE7 527 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 NAP1L4Q99733 375 aaKnown RBP9.8□□□□□ -0.84
USF1-210ENST00000531842 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
USF1-210ENST00000531842 DUSP15Q9H1R2 295 aaPredicted RBP9.8□□□□□ -0.84
USF1-210ENST00000531842 BHMT2Q9H2M3 363 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 ATXN3LQ9H3M9 355 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 C8orf33Q9H7E9 229 aaPredicted RBP9.8□□□□□ -0.84
USF1-210ENST00000531842 TUFT1Q9NNX1 390 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 HPS4Q9NQG7 708 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 TNFSF13BQ9Y275 285 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 FREM2Q5SZK8 3169 aa9.8□□□□□ -0.84
USF1-210ENST00000531842 PP2D1A8MPX8 630 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 E9PMD0 336 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 K7ERI5 159 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 SLC16A4O15374 487 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 PFKFB2O60825 505 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 RNF40O75150 1001 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 CXCL8P10145 99 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 XRCC6P12956 609 aaKnown RBP eCLIP9.79□□□□□ -0.84
USF1-210ENST00000531842 TNFSF9P41273 254 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 NPTX2P47972 431 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
USF1-210ENST00000531842 CREB5Q02930 508 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 RAD51AP2Q09MP3 1159 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 PLK5Q496M5 336 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 DGKKQ5KSL6 1271 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 DNAJB7Q7Z6W7 309 aaPredicted RBP9.79□□□□□ -0.84
USF1-210ENST00000531842 RALGPS2Q86X27 583 aaPredicted RBP9.79□□□□□ -0.84
USF1-210ENST00000531842 TTC16Q8NEE8 873 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 BEST2Q8NFU1 509 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 GIPC2Q8TF65 315 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 EZH1Q92800 747 aaPredicted RBP9.79□□□□□ -0.84
USF1-210ENST00000531842 ACAP3Q96P50 834 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 EDEM2Q9BV94 578 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 RUSC1Q9BVN2 902 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms