RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 SURF1Q15526 300 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 TRIP13Q15645 432 aaPredicted RBP17.86■□□□□ 0.45
VPS26B-206ENST00000531741 KYNUQ16719 465 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 DAB2IPQ5VWQ8 1189 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 CDCA2Q69YH5 1023 aaPredicted RBP17.86■□□□□ 0.45
VPS26B-206ENST00000531741 LBX2Q6XYB7 198 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 SEPT14Q6ZU15 432 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 ANKRD35Q8N283 1001 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 FAM167AQ96KS9 214 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 MRPL4Q9BYD3 311 aaKnown RBP17.86■□□□□ 0.45
VPS26B-206ENST00000531741 CCDC113Q9H0I3 377 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 ACTL7BQ9Y614 415 aa17.86■□□□□ 0.45
VPS26B-206ENST00000531741 GAS2O43903 313 aaKnown RBP17.85■□□□□ 0.45
VPS26B-206ENST00000531741 MSCO60682 206 aa17.85■□□□□ 0.45
VPS26B-206ENST00000531741 GSTA1P08263 222 aa17.85■□□□□ 0.45
VPS26B-206ENST00000531741 CDH5P33151 784 aaPredicted RBP17.85■□□□□ 0.45
VPS26B-206ENST00000531741 SCTRP47872 440 aa17.85■□□□□ 0.45
VPS26B-206ENST00000531741 STAT5BP51692 787 aa17.85■□□□□ 0.45
VPS26B-206ENST00000531741 STAT4Q14765 748 aa17.85■□□□□ 0.45
VPS26B-206ENST00000531741 IZUMO3Q5VZ72 239 aa17.85■□□□□ 0.45
VPS26B-206ENST00000531741 VSTM1Q6UX27 236 aa17.85■□□□□ 0.45
VPS26B-206ENST00000531741 ZCCHC9Q8N567 271 aaKnown RBP17.85■□□□□ 0.45
VPS26B-206ENST00000531741 LIASO43766 372 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 CDH16O75309 829 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 DNAJC8O75937 253 aaPredicted RBP17.84■□□□□ 0.45
VPS26B-206ENST00000531741 TJP3O95049 919 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 CD58P19256 250 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 MKRN4PQ13434 485 aaPredicted RBP17.84■□□□□ 0.45
VPS26B-206ENST00000531741 SPRED3Q2MJR0 410 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 PRAMEF18Q5VWM3 479 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 ANKS1BQ7Z6G8 1248 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 RIOX2Q8IUF8 465 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 RIBC1Q8N443 379 aaPredicted RBP17.84■□□□□ 0.45
VPS26B-206ENST00000531741 NIPA2Q8N8Q9 360 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 SLITRK1Q96PX8 696 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 CCDC77Q9BR77 488 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 PCDHGC3Q9UN70 934 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 TMEM120BA0PK00 339 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 XRCC4Q13426 336 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 SGSM1Q2NKQ1 1148 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 CCDC38Q502W7 563 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 IER5Q5VY09 327 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 EXOC8Q8IYI6 725 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 TMEM35BQ8NCS4 154 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.84■□□□□ 0.45
VPS26B-206ENST00000531741 NIF3L1Q9GZT8 377 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 EURLQ9NYK6 297 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 FZD1Q9UP38 647 aa17.84■□□□□ 0.45
VPS26B-206ENST00000531741 DRG1Q9Y295 367 aaKnown RBP17.84■□□□□ 0.45
VPS26B-206ENST00000531741 NDC80O14777 642 aa17.83■□□□□ 0.45
VPS26B-206ENST00000531741 OGTO15294 1046 aa17.83■□□□□ 0.45
VPS26B-206ENST00000531741 OAS1P00973 400 aaKnown RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 CST3P01034 146 aaPredicted RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 EIF4BP23588 611 aaKnown RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 RPL7AP62424 266 aaKnown RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 PIGHQ14442 188 aaPredicted RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 EAPPQ56P03 285 aaPredicted RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 PPP1R15BQ5SWA1 713 aa17.83■□□□□ 0.45
VPS26B-206ENST00000531741 SWT1Q5T5J6 900 aaKnown RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 METTL7BQ6UX53 244 aa17.83■□□□□ 0.45
VPS26B-206ENST00000531741 SEPT1Q8WYJ6 367 aa17.83■□□□□ 0.45
VPS26B-206ENST00000531741 ACO2Q99798 780 aaKnown RBP17.83■□□□□ 0.45
VPS26B-206ENST00000531741 SLC40A1Q9NP59 571 aa17.83■□□□□ 0.45
VPS26B-206ENST00000531741 USTQ9Y2C2 406 aa17.83■□□□□ 0.45
VPS26B-206ENST00000531741 LRRC37A2A6NM11 1700 aa17.83■□□□□ 0.44
VPS26B-206ENST00000531741 PTPRFP10586 1907 aa17.83■□□□□ 0.44
VPS26B-206ENST00000531741 VIMP08670 466 aaKnown RBP17.83■□□□□ 0.44
VPS26B-206ENST00000531741 ZNF252P-AS1Q0IIN9 211 aa17.83■□□□□ 0.44
VPS26B-206ENST00000531741 MXD4Q14582 209 aaPredicted RBP17.83■□□□□ 0.44
VPS26B-206ENST00000531741 DUOXA2Q1HG44 320 aa17.83■□□□□ 0.44
VPS26B-206ENST00000531741 TCP11Q8WWU5 503 aa17.83■□□□□ 0.44
VPS26B-206ENST00000531741 PRPF31Q8WWY3 499 aaKnown RBP17.83■□□□□ 0.44
VPS26B-206ENST00000531741 KLC4Q9NSK0 619 aa17.83■□□□□ 0.44
VPS26B-206ENST00000531741 DDX56Q9NY93 547 aaKnown RBP17.83■□□□□ 0.44
VPS26B-206ENST00000531741 RGS17Q9UGC6 210 aaPredicted RBP17.83■□□□□ 0.44
VPS26B-206ENST00000531741 CPSF3Q9UKF6 684 aaKnown RBP17.83■□□□□ 0.44
VPS26B-206ENST00000531741 ABLIM1O14639 778 aa17.82■□□□□ 0.44
VPS26B-206ENST00000531741 DNALI1O14645 258 aaPredicted RBP17.82■□□□□ 0.44
VPS26B-206ENST00000531741 SNX3O60493 162 aa17.82■□□□□ 0.44
VPS26B-206ENST00000531741 SSR1P43307 286 aaKnown RBP17.82■□□□□ 0.44
VPS26B-206ENST00000531741 DNAJC24Q6P3W2 148 aa17.82■□□□□ 0.44
VPS26B-206ENST00000531741 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
VPS26B-206ENST00000531741 CISHQ9NSE2 258 aa17.82■□□□□ 0.44
VPS26B-206ENST00000531741 SLC12A4Q9UP95 1085 aa17.82■□□□□ 0.44
VPS26B-206ENST00000531741 IGKV6-21A0A0C4DH24 114 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 TNFSF9P41273 254 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 IFNAR2P48551 515 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 VPS41P49754 854 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 CCDC142Q17RM4 750 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 CHADLQ6NUI6 762 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 POTEAQ6S8J7 498 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 SPOCD1Q6ZMY3 1216 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 GSTA5Q7RTV2 222 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 POLNQ7Z5Q5 900 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 DEFB132Q7Z7B7 95 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 ALLCQ8N6M5 410 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 CKAP2Q8WWK9 683 aa17.81■□□□□ 0.44
VPS26B-206ENST00000531741 NKD2Q969F2 451 aaPredicted RBP17.81■□□□□ 0.44
VPS26B-206ENST00000531741 TTC25Q96NG3 672 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms