RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 ZSCAN18Q8TBC5 510 aaPredicted RBP16.85■□□□□ 0.29
CLNS1A-210ENST00000528364 LARP4BQ92615 738 aaKnown RBP16.85■□□□□ 0.29
CLNS1A-210ENST00000528364 CLIC6Q96NY7 704 aa16.85■□□□□ 0.29
CLNS1A-210ENST00000528364 CCSER1Q9C0I3 900 aa16.85■□□□□ 0.29
CLNS1A-210ENST00000528364 ASAH2Q9NR71 780 aa16.85■□□□□ 0.29
CLNS1A-210ENST00000528364 NDRG2Q9UN36 371 aaKnown RBP16.85■□□□□ 0.29
CLNS1A-210ENST00000528364 SCN1AP35498 2009 aa16.85■□□□□ 0.29
CLNS1A-210ENST00000528364 MTMR11A4FU01 709 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 OR6C75A6NL08 312 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 PIRO00625 290 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 XPOTO43592 962 aaKnown RBP16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 BMP15O95972 392 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 CEBPZQ03701 1054 aaKnown RBP16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 STXBP5Q5T5C0 1151 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 ADALQ6DHV7 355 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 SFR1Q86XK3 245 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 TMC8Q8IU68 726 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 MAP4K3Q8IVH8 894 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 KIAA2013Q8IYS2 634 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 ZNF687Q8N1G0 1237 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 NELL2Q99435 816 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 ZNF334Q9HCZ1 680 aaPredicted RBP16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 TBC1D7Q9P0N9 293 aa16.84■□□□□ 0.29
CLNS1A-210ENST00000528364 A0A1W2PRU2 124 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 ANO9A1A5B4 782 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 HEPACAM2A8MVW5 462 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 TULP1O00294 542 aaPredicted RBP16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 PSMC3P17980 439 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 ID4P47928 161 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 EPHB3P54753 998 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 KCNA1Q09470 495 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 CUL4AQ13619 759 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 TMEM132DQ14C87 1099 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 SCARA3Q6AZY7 606 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 ZNF720Q7Z2F6 126 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 DNAJB7Q7Z6W7 309 aaPredicted RBP16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 CD302Q8IX05 232 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 SUMF1Q8NBK3 374 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 ZSWIM2Q8NEG5 633 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 OR10T2Q8NGX3 314 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 DNASE1L2Q92874 299 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 PANK2Q9BZ23 570 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 SLITRK6Q9H5Y7 841 aa16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 FBXO2Q9UK22 296 aaPredicted RBP16.83■□□□□ 0.28
CLNS1A-210ENST00000528364 MYMKA6NI61 221 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 ADSSP30520 456 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 ALDH1A3P47895 512 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 WNT7BP56706 349 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 MTAPQ13126 283 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 MYBPC2Q14324 1141 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 ZC3H14Q6PJT7 736 aaKnown RBP16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 GAREM2Q75VX8 874 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 LRRTM3Q86VH5 581 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 MFSD6LQ8IWD5 586 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 KRI1Q8N9T8 703 aaKnown RBP16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 LEMD2Q8NC56 503 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 IRF7Q92985 503 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 LRRC3BQ96PB8 259 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 TSPAN18Q96SJ8 248 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 OXCT2Q9BYC2 517 aaPredicted RBP16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 TRPV4Q9HBA0 871 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 FBXO4Q9UKT5 387 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 AGO2Q9UKV8 859 aaKnown RBP16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 STYXL1Q9Y6J8 313 aa16.82■□□□□ 0.28
CLNS1A-210ENST00000528364 CYB561D2O14569 222 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 ZNF263O14978 683 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 NCAM2O15394 837 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 ODC1P11926 461 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 SCP2P22307 547 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 RESTQ13127 1097 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 ZNF528Q3MIS6 628 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 SLC39A12Q504Y0 691 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 WSCD1Q658N2 575 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 EFCAB13Q8IY85 973 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 TTC8Q8TAM2 541 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 BORCS6Q96GS4 357 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 FAM84AQ96KN4 292 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 HINFPQ9BQA5 517 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 LPIN3Q9BQK8 851 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 MKNK1Q9BUB5 465 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 STRA6Q9BX79 667 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 ST6GALNAC4Q9H4F1 302 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 ASB7Q9H672 318 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 LMAN1LQ9HAT1 526 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 MRPS17Q9Y2R5 130 aaKnown RBP16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 DERAQ9Y315 318 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 PIAS3Q9Y6X2 628 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 CEP250Q9BV73 2442 aa16.81■□□□□ 0.28
CLNS1A-210ENST00000528364 PATJQ8NI35 1801 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 MAN2B1O00754 1011 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 KINO60870 393 aaKnown RBP16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 CCNE1P24864 410 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 RPS9P46781 194 aaKnown RBP16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 SOX9P48436 509 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 PLD1Q13393 1074 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 RRAGBQ5VZM2 374 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms