RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TATDN2Q93075 761 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 UBN1Q9NPG3 1134 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 COL18A1P39060 1754 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 IGLV3-22A0A075B6J6 115 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 TISP43B9A030 160 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 PGK1P00558 417 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 GPD1P21695 349 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 EIF4BP23588 611 aaKnown RBP15.89■□□□□ 0.13
USP47-207ENST00000527733 CACNB2Q08289 660 aaPredicted RBP15.89■□□□□ 0.13
USP47-207ENST00000527733 MGAT5BQ3V5L5 792 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 C1orf228Q6PIY5 440 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 LRRC55Q6ZSA7 311 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 VPS52Q8N1B4 723 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 PPP4R1Q8TF05 950 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 DDX27Q96GQ7 796 aaKnown RBP15.89■□□□□ 0.13
USP47-207ENST00000527733 RNF208Q9H0X6 261 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 KLHL11Q9NVR0 708 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 TFR2Q9UP52 801 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 TADA3O75528 432 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 TPI1P60174 286 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 DEUP1Q05D60 604 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 TMED2Q15363 201 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 PTGISQ16647 500 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 HSDL1Q3SXM5 330 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 ZNF571Q7Z3V5 609 aaPredicted RBP15.88■□□□□ 0.13
USP47-207ENST00000527733 SLC9A9Q8IVB4 645 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 SEPT5Q99719 369 aaPredicted RBP15.88■□□□□ 0.13
USP47-207ENST00000527733 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 DPYSL4O14531 572 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 FLT3LGP49771 235 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 SH3D19Q5HYK7 790 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 ZC3H18Q86VM9 953 aaKnown RBP15.88■□□□□ 0.13
USP47-207ENST00000527733 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.88■□□□□ 0.13
USP47-207ENST00000527733 MS4A14Q96JA4 679 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 C10orf71Q711Q0 1435 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 ZNF189O75820 626 aaPredicted RBP15.88■□□□□ 0.13
USP47-207ENST00000527733 MT-ND3P03897 115 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 PTPN11Q06124 597 aaPredicted RBP15.88■□□□□ 0.13
USP47-207ENST00000527733 DCAF6Q58WW2 860 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 ARSHQ5FYA8 562 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 CYP4A22Q5TCH4 519 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 DLK2Q6UY11 383 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 ADGRF2Q8IZF7 708 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 TPCN2Q8NHX9 752 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 TTC1Q99614 292 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 OSBPL8Q9BZF1 889 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 TJP2Q9UDY2 1190 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 NWD2Q9ULI1 1742 aa15.88■□□□□ 0.13
USP47-207ENST00000527733 BNIP3LO60238 219 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 SLC4A1P02730 911 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
USP47-207ENST00000527733 ORC1Q13415 861 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 CAPSQ13938 189 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 NYAP1Q6ZVC0 841 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 RAPH1Q70E73 1250 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 CYFIP2Q96F07 1278 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 CFAP36Q96G28 342 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 ZNF512Q96ME7 567 aaPredicted RBP15.87■□□□□ 0.13
USP47-207ENST00000527733 CHORDC1Q9UHD1 332 aaPredicted RBP15.87■□□□□ 0.13
USP47-207ENST00000527733 LRRIQ3A6PVS8 624 aaPredicted RBP15.87■□□□□ 0.13
USP47-207ENST00000527733 PRRG1O14668 218 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 HGSO14964 777 aaPredicted RBP15.87■□□□□ 0.13
USP47-207ENST00000527733 PPP1R12AO14974 1030 aaPredicted RBP15.87■□□□□ 0.13
USP47-207ENST00000527733 PEX10O60683 326 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 SMIM10L2AP0DMW4 78 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 SMIM10L2BP0DMW5 78 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 KCNA2P16389 499 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 ARHGAP25P42331 645 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 COBLL1Q53SF7 1204 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 C6orf118Q5T5N4 469 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 ITPRIPL1Q6GPH6 555 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 TMEM176AQ96HP8 235 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 SPON2Q9BUD6 331 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 TBK1Q9UHD2 729 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 TNFSF13BQ9Y275 285 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 MAPK13O15264 365 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 AKAP5P24588 427 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 ICAM3P32942 547 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 IL9RQ01113 521 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 ADCY2Q08462 1091 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 AP1B1Q10567 949 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 SNX17Q15036 470 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 PPTC7Q8NI37 304 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 GOLPH3Q9H4A6 298 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 AAASQ9NRG9 546 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 METTL5Q9NRN9 209 aaKnown RBP15.87■□□□□ 0.13
USP47-207ENST00000527733 CNTNAP1P78357 1384 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 ASTN1O14525 1302 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 BMT2Q1RMZ1 405 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 FOXR2Q6PJQ5 311 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 SLC47A2Q86VL8 602 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 GPR20Q99678 358 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 CARD9Q9H257 536 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 ATP11BQ9Y2G3 1177 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 NUP98P52948 1817 aa15.87■□□□□ 0.13
USP47-207ENST00000527733 TARSL2A2RTX5 802 aaKnown RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 LACTBL1A8MY62 500 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 AP1G2O75843 785 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 RECQLP46063 649 aaPredicted RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 RNF219Q5W0B1 726 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms