RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 IRF6O14896 467 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 OGTO15294 1046 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 LGR5O75473 907 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 ACSL3O95573 720 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 PGK2P07205 417 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 BRD2P25440 801 aaKnown RBP18.65■□□□□ 0.58
USH1C-205ENST00000527020 GJC1P36383 396 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 RNF149Q8NC42 400 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 PWWP2AQ96N64 755 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 ZNF317Q96PQ6 595 aaPredicted RBP18.65■□□□□ 0.58
USH1C-205ENST00000527020 SELENOSQ9BQE4 189 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 ROPN1BQ9BZX4 212 aaPredicted RBP18.65■□□□□ 0.58
USH1C-205ENST00000527020 ROPN1Q9HAT0 212 aaPredicted RBP18.65■□□□□ 0.58
USH1C-205ENST00000527020 KLHL11Q9NVR0 708 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 IP6K2Q9UHH9 426 aa18.65■□□□□ 0.58
USH1C-205ENST00000527020 A0A0G2JLL6 359 aaPredicted RBP18.64■□□□□ 0.57
USH1C-205ENST00000527020 HOXC6P09630 235 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 ATF2P15336 505 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 OGDHQ02218 1023 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 IFT88Q13099 833 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 PRRT2Q7Z6L0 340 aaPredicted RBP18.64■□□□□ 0.57
USH1C-205ENST00000527020 WDTC1Q8N5D0 677 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 OTUD6BQ8N6M0 293 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 KAT2BQ92831 832 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 FAM212AQ96EL1 285 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 NIF3L1Q9GZT8 377 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 ASCC2Q9H1I8 757 aaPredicted RBP18.64■□□□□ 0.57
USH1C-205ENST00000527020 HOMER3Q9NSC5 361 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 CISHQ9NSE2 258 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 ADM5C9JUS6 153 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 KIAA0754O94854 1291 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 PROZP22891 400 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 VPS41P49754 854 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 LONRF1Q17RB8 773 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 TFAP2BQ92481 460 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 SEC16BQ96JE7 1060 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 TRAIPQ9BWF2 469 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 TXNRD2Q9NNW7 524 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 DNAJC17Q9NVM6 304 aaKnown RBP18.64■□□□□ 0.57
USH1C-205ENST00000527020 CSADQ9Y600 493 aa18.64■□□□□ 0.57
USH1C-205ENST00000527020 PI4K2BG5E9Z4 385 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 GJB1P08034 283 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 KLRC2P26717 231 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 ADCY8P40145 1251 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 SSR1P43307 286 aaKnown RBP18.63■□□□□ 0.57
USH1C-205ENST00000527020 CDR1P51861 262 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 IRX3P78415 501 aaPredicted RBP18.63■□□□□ 0.57
USH1C-205ENST00000527020 CAV1Q03135 178 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 MXD4Q14582 209 aaPredicted RBP18.63■□□□□ 0.57
USH1C-205ENST00000527020 PLCB4Q15147 1175 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 MAPK6Q16659 721 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 DUOXA2Q1HG44 320 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 TTC31Q49AM3 519 aaPredicted RBP18.63■□□□□ 0.57
USH1C-205ENST00000527020 CCDC38Q502W7 563 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 ZNF394Q53GI3 561 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 PPP1R15BQ5SWA1 713 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 CELF3Q5SZQ8 465 aaKnown RBP18.63■□□□□ 0.57
USH1C-205ENST00000527020 PRUNE1Q86TP1 453 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 EXOC3L1Q86VI1 746 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 TCP11Q8WWU5 503 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 CHMP6Q96FZ7 201 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 SCLT1Q96NL6 688 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 JPH2Q9BR39 696 aaPredicted RBP18.63■□□□□ 0.57
USH1C-205ENST00000527020 XYLT2Q9H1B5 865 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 ELP3Q9H9T3 547 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 PTPRHQ9HD43 1115 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 ANAPC5Q9UJX4 755 aa18.63■□□□□ 0.57
USH1C-205ENST00000527020 LSM8O95777 96 aaKnown RBP18.62■□□□□ 0.57
USH1C-205ENST00000527020 TTC4O95801 387 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 WEE2P0C1S8 567 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 NFX1Q12986 1120 aaKnown RBP18.62■□□□□ 0.57
USH1C-205ENST00000527020 R3HDM1Q15032 1099 aaKnown RBP18.62■□□□□ 0.57
USH1C-205ENST00000527020 SGSM1Q2NKQ1 1148 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 TMEM63BQ5T3F8 832 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 ZBTB8OSQ8IWT0 167 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 SLITRK1Q96PX8 696 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 F8VP50 259 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 GAS2O43903 313 aaKnown RBP18.62■□□□□ 0.57
USH1C-205ENST00000527020 CALB1P05937 261 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 KRT10P13645 584 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 CDH5P33151 784 aaPredicted RBP18.62■□□□□ 0.57
USH1C-205ENST00000527020 ASPAP45381 313 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 KYNUQ16719 465 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 GPAT2Q6NUI2 795 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 TSHZ1Q6ZSZ6 1077 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 PLPPR4Q7Z2D5 763 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 ZBTB10Q96DT7 871 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 OTUD5Q96G74 571 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 CLMNQ96JQ2 1002 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 ZNF668Q96K58 619 aaPredicted RBP18.62■□□□□ 0.57
USH1C-205ENST00000527020 MCEEQ96PE7 176 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 NINJ2Q9NZG7 142 aa18.62■□□□□ 0.57
USH1C-205ENST00000527020 B4GALT5O43286 388 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 FSBPO95073 299 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 TFAMQ00059 246 aaKnown RBP18.61■□□□□ 0.57
USH1C-205ENST00000527020 TXNRD3NBQ6F5E7 133 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 MPZL3Q6UWV2 235 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 MFSD7Q6UXD7 560 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 SCARA5Q6ZMJ2 495 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms