RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ADAM9Q13443 819 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 COBLL1Q53SF7 1204 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 OVOS1Q6IE37 1185 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 METTL23Q86XA0 190 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 LRRC52Q8N7C0 313 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 PARD3BQ8TEW8 1205 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 NECTIN4Q96NY8 510 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 PHF7Q9BWX1 381 aaPredicted RBP17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 CD320Q9NPF0 282 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 DSEQ9UL01 958 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 FRMD4BQ9Y2L6 1034 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 DOCK6Q96HP0 2047 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 WDR27A2RRH5 827 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 C19orf67A6NJJ6 358 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 CST3P01034 146 aaPredicted RBP17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 BFSP1Q12934 665 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 CAMK4Q16566 473 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 UVSSAQ2YD98 709 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 ZCWPW2Q504Y3 356 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 LIN9Q5TKA1 542 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 WSCD1Q658N2 575 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 CENPPQ6IPU0 288 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 CYP26C1Q6V0L0 522 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 C15orf39Q6ZRI6 1047 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 ADSSL1Q8N142 457 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 GJD3Q8N144 294 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 PRKD2Q9BZL6 878 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 POMKQ9H5K3 350 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 ZDHHC7Q9NXF8 308 aa17.47■□□□□ 0.39
SSSCA1-202ENST00000526433 OR6C75A6NL08 312 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 LRRIQ3A6PVS8 624 aaPredicted RBP17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 MAPK13O15264 365 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 PAPLNO95428 1278 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 C8AP07357 584 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 ELF1P32519 619 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 SSTR3P32745 418 aaPredicted RBP17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 CLDN10P78369 228 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 MYO1EQ12965 1108 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 PPM1LQ5SGD2 360 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 TPGS2Q68CL5 300 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 TMC2Q8TDI7 906 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 SMG7Q92540 1137 aaKnown RBP17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 ZNF707Q96C28 371 aaPredicted RBP17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 HPDLQ96IR7 371 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 RPGRIP1Q96KN7 1286 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 GBP4Q96PP9 640 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 RHOBTB2Q9BYZ6 727 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 PIDD1Q9HB75 910 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 LMBRD1Q9NUN5 540 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 GDAP2Q9NXN4 497 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 C2orf16Q68DN1 1984 aa17.46■□□□□ 0.39
SSSCA1-202ENST00000526433 TNFRSF10AO00220 468 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 BIN1O00499 593 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 HUS1O60921 280 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 AKAP3O75969 853 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 HNRNPA1P09651 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 OR4Q2P0C623 313 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 CPB1P15086 417 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 ATF2P15336 505 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 BMP6P22004 513 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 PSMC2P35998 433 aaKnown RBP17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 AP3M2P53677 418 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 DLG4P78352 724 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 STIM1Q13586 685 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 MORC3Q14149 939 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 ANKRD40Q6AI12 368 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 RNF19BQ6ZMZ0 732 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 CCDC149Q6ZUS6 474 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 RTL10Q7L3V2 364 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 THEM5Q8N1Q8 247 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 SLC7A14Q8TBB6 771 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 TSG101Q99816 390 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 AFF4Q9UHB7 1163 aaKnown RBP17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 SNX9Q9Y5X1 595 aa17.45■□□□□ 0.38
SSSCA1-202ENST00000526433 LOC730098B7Z3J9 87 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 PPP1R3GB7ZBB8 358 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 PRRG1O14668 218 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 CETN3O15182 167 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 PHACTR2O75167 634 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 SEC24AO95486 1093 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 C4BPAP04003 597 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 CD44P16070 742 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 CCNE1P24864 410 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 VAMP7P51809 220 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 ADCY1Q08828 1119 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 GPR17Q13304 367 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 TRPC3Q13507 836 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 FAM186BQ8IYM0 893 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 TCEAL8Q8IYN2 117 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 PDCL2Q8N4E4 241 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 EEF2KMTQ96G04 330 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 DHTKD1Q96HY7 919 aaPredicted RBP17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 TMEM209Q96SK2 561 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 RTP3Q9BQQ7 232 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 CYP4F11Q9HBI6 524 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 KIAA1468Q9P260 1216 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 MAFFQ9ULX9 164 aa17.44■□□□□ 0.38
SSSCA1-202ENST00000526433 L1RE1Q9UN81 338 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms