RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 H3BNC9 293 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 TOR1BO14657 336 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 URI1O94763 535 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 SUN1O94901 812 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 HAUS5O94927 633 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 TOP3BO95985 862 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 SBK3P0C264 359 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 NHLRC4P0CG21 123 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 NR2F6P10588 404 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 CYP2D6P10635 497 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 OSMP13725 252 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 DRD4P21917 467 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 CERS1P27544 350 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 CCT8P50990 548 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC5A3P53794 718 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 NXPH1P58417 271 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 CTXN1P60606 82 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 PROSER3Q2NL68 480 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 ZNF260Q3ZCT1 412 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 CEP78Q5JTW2 689 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 STRA8Q7Z7C7 330 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 RHOT1Q8IXI2 618 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 FBXO41Q8TF61 875 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 LRIG1Q96JA1 1093 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC2A13Q96QE2 648 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 C7orf25Q9BPX7 421 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 KLC4Q9NSK0 619 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 INTUQ9ULD6 942 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 MRPL42Q9Y6G3 142 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 PPP6CO00743 305 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 GRM6O15303 877 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 RHOP08100 348 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 EBLN1P0CF75 366 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 MTHFD1P11586 935 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 SFPQP23246 707 aaKnown RBP eCLIP3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 GPR3P46089 330 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 ANXA11P50995 505 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 POLGP54098 1239 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 ITIH3Q06033 890 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 RAPGEF1Q13905 1077 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 CFAP52Q8N1V2 620 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 PPM1NQ8N819 430 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 DCBLD1Q8N8Z6 715 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC17A8Q8NDX2 589 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 PBKQ96KB5 322 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 KLHL32Q96NJ5 620 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 IMPG2Q9BZV3 1241 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 C14orf119Q9NWQ9 140 aa3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 APOBEC2Q9Y235 224 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-219ENST00000526299 CCDC195A0A1B0GUA6 201 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 INSIG1O15503 277 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 FAM163BP0C2L3 166 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 SNHG28P0DPA3 235 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 NR4A2P43354 598 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 HLXQ14774 488 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 KIAA0907Q7Z7F0 614 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 RSPH3Q86UC2 560 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 SAMD14Q8IZD0 417 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 NRG4Q8WWG1 115 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 RFKQ969G6 155 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 RAB24Q969Q5 203 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 DRC1Q96MC2 740 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 SH3BP4Q9P0V3 963 aa3.8□□□□□ -1.8
ECHDC1-219ENST00000526299 CCDC187A0A096LP49 1063 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 TISP43B9A030 160 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 F5H697 171 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 MMP13P45452 471 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 NPTX2P47972 431 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 MTNR1BP49286 362 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 PABPC1LQ4VXU2 614 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC30A10Q6XR72 485 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 ADAMTS15Q8TE58 950 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 AHCYL2Q96HN2 611 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 TMX3Q96JJ7 454 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 VPS16Q9H269 839 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 DKK3Q9UBP4 350 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC45A2Q9UMX9 530 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 PCDHA13Q9Y5I0 950 aa3.79□□□□□ -1.8
ECHDC1-219ENST00000526299 GYS2P54840 703 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 PIGFQ07326 219 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 FAPQ12884 760 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 RABEP1Q15276 862 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 TMPRSS9Q7Z410 1059 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 RNF180Q86T96 592 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 ZDHHC17Q8IUH5 632 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 IL17RDQ8NFM7 739 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 UBXN4Q92575 508 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 REPS1Q96D71 796 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 HMCESQ96FZ2 354 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 CAMKK2Q96RR4 588 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 TRIB1Q96RU8 372 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 PACSIN1Q9BY11 444 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 TPSD1Q9BZJ3 242 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 AMBRA1Q9C0C7 1298 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 CCM2LQ9NUG4 571 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 JKAMPQ9P055 326 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 PCDHB1Q9Y5F3 818 aa3.78□□□□□ -1.8
ECHDC1-219ENST00000526299 A0A0B4J269 797 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 CYSRT1A8MQ03 144 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 KCNU1A8MYU2 1149 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms