RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 MYO1EQ12965 1108 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 C1orf220Q5T0J3 134 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 TPGS2Q68CL5 300 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 LMBRD2Q68DH5 695 aaPredicted RBP18.59■□□□□ 0.57
LMX1B-203ENST00000526117 LLGL2Q6P1M3 1020 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 RSPO2Q6UXX9 243 aaPredicted RBP18.59■□□□□ 0.57
LMX1B-203ENST00000526117 C15orf39Q6ZRI6 1047 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 DPH6Q7L8W6 267 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 MLKLQ8NB16 471 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 SUSD6Q92537 303 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 POP1Q99575 1024 aaKnown RBP18.59■□□□□ 0.57
LMX1B-203ENST00000526117 SFXN1Q9H9B4 322 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 ZDHHC7Q9NXF8 308 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 FBXL5Q9UKA1 691 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 FBXW11Q9UKB1 542 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 CDY1Q9Y6F8 540 aa18.59■□□□□ 0.57
LMX1B-203ENST00000526117 H3BQ06 376 aaPredicted RBP18.58■□□□□ 0.56
LMX1B-203ENST00000526117 BIN1O00499 593 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 ADAM12O43184 909 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 MBTPS2O43462 519 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 ABLIM3O94929 683 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 C4BPAP04003 597 aaKnown RBP18.58■□□□□ 0.56
LMX1B-203ENST00000526117 EPB41P11171 864 aaKnown RBP18.58■□□□□ 0.56
LMX1B-203ENST00000526117 KRT13P13646 458 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 RPL17P18621 184 aaKnown RBP18.58■□□□□ 0.56
LMX1B-203ENST00000526117 HOXA9P31269 272 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 GTF2H1P32780 548 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 OR1D2P34982 312 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 PAK1Q13153 545 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 SMAD2Q15796 467 aaKnown RBP18.58■□□□□ 0.56
LMX1B-203ENST00000526117 UVSSAQ2YD98 709 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 ZACNQ401N2 412 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 CTXN3Q4LDR2 81 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 CT47A1Q5JQC4 288 aaPredicted RBP18.58■□□□□ 0.56
LMX1B-203ENST00000526117 ISM2Q6H9L7 571 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 OVOS1Q6IE37 1185 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 TMEM86AQ8N2M4 240 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 TOP6BLQ8N6T0 577 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 ZNF461Q8TAF7 563 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 ADAM7Q9H2U9 754 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 MAN1C1Q9NR34 630 aa18.58■□□□□ 0.56
LMX1B-203ENST00000526117 R3HCC1Q9Y3T6 440 aaKnown RBP18.58■□□□□ 0.56
LMX1B-203ENST00000526117 MTCL1Q9Y4B5 1905 aaKnown RBP18.57■□□□□ 0.56
LMX1B-203ENST00000526117 CYB561D2O14569 222 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 TDRD10Q5VZ19 366 aaKnown RBP18.57■□□□□ 0.56
LMX1B-203ENST00000526117 PTCRAQ6ISU1 281 aaPredicted RBP18.57■□□□□ 0.56
LMX1B-203ENST00000526117 EP400NLQ6ZTU2 488 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 FILIP1Q7Z7B0 1213 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 METTL23Q86XA0 190 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 NELFBQ8WX92 580 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 HPDLQ96IR7 371 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 DUSP9Q99956 384 aaKnown RBP18.57■□□□□ 0.56
LMX1B-203ENST00000526117 XYLT2Q9H1B5 865 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 PRKAG3Q9UGI9 489 aa18.57■□□□□ 0.56
LMX1B-203ENST00000526117 TRIM49BA6NDI0 452 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 STX10O60499 249 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 CST3P01034 146 aaPredicted RBP18.56■□□□□ 0.56
LMX1B-203ENST00000526117 KRT19P08727 400 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 ATF2P15336 505 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 KCNQ1P51787 676 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 DLG4P78352 724 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 ROR1Q01973 937 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 KREMEN2Q8NCW0 462 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 TAF4BQ92750 862 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 SYAP1Q96A49 352 aaPredicted RBP18.56■□□□□ 0.56
LMX1B-203ENST00000526117 FAM84AQ96KN4 292 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 NECTIN4Q96NY8 510 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 METTL14Q9HCE5 456 aaKnown RBP18.56■□□□□ 0.56
LMX1B-203ENST00000526117 HSFX1Q9UBD0 423 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 RWDD2AQ9UIY3 292 aa18.56■□□□□ 0.56
LMX1B-203ENST00000526117 WDR27A2RRH5 827 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 GABRDO14764 452 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 HUS1O60921 280 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 HNRNPA1P09651 372 aaKnown RBP eCLIP18.55■□□□□ 0.56
LMX1B-203ENST00000526117 MARSP56192 900 aaKnown RBP18.55■□□□□ 0.56
LMX1B-203ENST00000526117 SMARCB1Q12824 385 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 GPR17Q13304 367 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 SCARA3Q6AZY7 606 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 CES5AQ6NT32 575 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 SV2AQ7L0J3 742 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 FRMD5Q7Z6J6 570 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 GPR149Q86SP6 731 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 PALB2Q86YC2 1186 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 TCEAL8Q8IYN2 117 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 PDCL2Q8N4E4 241 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 TMEM8AQ9HCN3 771 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 AFF4Q9UHB7 1163 aaKnown RBP18.55■□□□□ 0.56
LMX1B-203ENST00000526117 L1RE1Q9UN81 338 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 CTNND2Q9UQB3 1225 aa18.55■□□□□ 0.56
LMX1B-203ENST00000526117 TIMM13Q9Y5L4 95 aaPredicted RBP18.55■□□□□ 0.56
LMX1B-203ENST00000526117 PMM2O15305 246 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 ZMYND10O75800 440 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 VNN1O95497 513 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
LMX1B-203ENST00000526117 GNA14O95837 355 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 MTHFRP42898 656 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 LHX1P48742 406 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 NLRP12P59046 1061 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 TRPC3Q13507 836 aa18.54■□□□□ 0.56
LMX1B-203ENST00000526117 NCOA4Q13772 614 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms