RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ABHD10Q9NUJ1 306 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 SCN1AP35498 2009 aa16.96■□□□□ 0.3
TSPAN4-213ENST00000524895 ARHGEF37A1IGU5 675 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 CARNS1A5YM72 827 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 F8W810 466 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 CYB561D2O14569 222 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 TRAPPC3O43617 180 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 ITGB1P05556 798 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 WEE2P0C1S8 567 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 ODC1P11926 461 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 KRT5P13647 590 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 IGFBP6P24592 240 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 PBX3P40426 434 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 BRCC3P46736 316 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 AARSP49588 968 aaKnown RBP eCLIP16.95■□□□□ 0.38e-6■■■■■ 52.4
TSPAN4-213ENST00000524895 RGS19P49795 217 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 SFMBT2Q5VUG0 894 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 TTC39CQ8N584 583 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 TOP6BLQ8N6T0 577 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 TC2NQ8N9U0 490 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 SHC3Q92529 594 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 GPR88Q9GZN0 384 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 SDCBP2Q9H190 292 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 AAASQ9NRG9 546 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 CISHQ9NSE2 258 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 ADAM28Q9UKQ2 775 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 PCDHB4Q9Y5E5 795 aa16.95■□□□□ 0.3
TSPAN4-213ENST00000524895 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 I3L4J1 428 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 FOXN3O00409 490 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 PNMA6AP0CW24 399 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 ACO1P21399 889 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 SOX5P35711 763 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 CDH8P55286 799 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 ASIC2Q16515 512 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 TIGD5Q53EQ6 642 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 KCNT2Q6UVM3 1135 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 CD300LGQ6UXG3 332 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 ADGRF2Q8IZF7 708 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 OR8K1Q8NGG5 319 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 DNAJC7Q99615 494 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 FAM124BQ9H5Z6 455 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 ZNHIT6Q9NWK9 470 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 MARCH5Q9NX47 278 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 SF3B1O75533 1304 aaKnown RBP eCLIP16.94■□□□□ 0.3
TSPAN4-213ENST00000524895 TACC1O75410 805 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 GFPT2O94808 682 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 CCDC172P0C7W6 258 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 FERP16591 822 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 ARID5AQ03989 594 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 TMEM270Q6UE05 265 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 DPH6Q7L8W6 267 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 UBR7Q8N806 425 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 COLGALT1Q8NBJ5 622 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 RBBP8NLQ8NC74 664 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 SYN2Q92777 582 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 PANX2Q96RD6 677 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 MRPL45Q9BRJ2 306 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 SNX25Q9H3E2 840 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 DSEQ9UL01 958 aa16.93■□□□□ 0.3
TSPAN4-213ENST00000524895 KIAA1671Q9BY89 1806 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 M0QZQ0 153 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 PPM1AP35813 382 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 RABGGTBP53611 331 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 INCA1Q0VD86 236 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 ELAVL2Q12926 359 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 SMYD5Q6GMV2 418 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 FUT10Q6P4F1 479 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 LIMS2Q7Z4I7 341 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 TMEM173Q86WV6 379 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 METTL23Q86XA0 190 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 FAM71AQ8IYT1 594 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 TMEM86AQ8N2M4 240 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 OR6B3Q8NGW1 331 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 AIPL1Q9NZN9 384 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 BARX2Q9UMQ3 279 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 PCDHB8Q9UN66 801 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 PCDHB12Q9Y5F1 795 aa16.92■□□□□ 0.3
TSPAN4-213ENST00000524895 TSC2P49815 1807 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 LCHNA4D1U4 455 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 CILPO75339 1184 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 WARSP23381 471 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 HNRNPH3P31942 346 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 NDST1P52848 882 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 ZNF394Q53GI3 561 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 WSCD1Q658N2 575 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 E4F1Q66K89 784 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 FAM109BQ6ICB4 259 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 SLC39A11Q8N1S5 342 aa16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 BCL7CQ8WUZ0 217 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-213ENST00000524895 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms