RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CLRN1P58418 232 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 MRPS9P82933 396 aaKnown RBP3.91□□□□□ -1.78
CSDE1-208ENST00000524652 RRS1Q15050 365 aaKnown RBP3.91□□□□□ -1.78
CSDE1-208ENST00000524652 ERCC6LQ2NKX8 1250 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 CCDC184Q52MB2 194 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 ATXN7L2Q5T6C5 722 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-208ENST00000524652 PKD1L3Q7Z443 1732 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 RNF180Q86T96 592 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 RHOT2Q8IXI1 618 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 SLC9A6Q92581 669 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 CAVIN3Q969G5 261 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 NEU1Q99519 415 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 BCO1Q9HAY6 547 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 ATP11BQ9Y2G3 1177 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 TOGARAM1Q9Y4F4 1720 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 TNFRSF18Q9Y5U5 241 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 COL5A2P05997 1499 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-208ENST00000524652 CGNL1Q0VF96 1302 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 MAP3K19Q56UN5 1328 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 SPATA31A6Q5VVP1 1343 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 ITGB4P16144 1822 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 AATKQ6ZMQ8 1374 aa3.9□□□□□ -1.78
CSDE1-208ENST00000524652 KAT6BQ8WYB5 2073 aa3.9□□□□□ -1.78
CSDE1-208ENST00000524652 UNC119BA6NIH7 251 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 CXorf49A8MYA2 514 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 NEMP1O14524 444 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 AKR1B10O60218 316 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 SPDEFO95238 335 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 EGR2P11161 476 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 MTHFD2P13995 350 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 ALOX15P16050 662 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 ECHS1P30084 290 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 PTPN7P35236 360 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 TNNT2P45379 298 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 CHN2P52757 468 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 MRPS21P82921 87 aaKnown RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 SP140Q13342 867 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 TP53BP2Q13625 1128 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 RRP12Q5JTH9 1297 aaKnown RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 FAM180AQ6UWF9 173 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 ARHGEF25Q86VW2 580 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 DRC7Q8IY82 874 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 TRMT2AQ8IZ69 625 aaKnown RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 GPR156Q8NFN8 814 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 OR7D4Q8NG98 312 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 SLC35B2Q8TB61 432 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 NTN5Q8WTR8 489 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 AUTS2Q8WXX7 1259 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 RIN2Q8WYP3 895 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 COG3Q96JB2 828 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 FAM30AQ9NZY2 134 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 POLKQ9UBT6 870 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 DPP7Q9UHL4 492 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 SCOCQ9UIL1 159 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 KNSTRNQ9Y448 316 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 COX11Q9Y6N1 276 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 LRP5O75197 1615 aa3.9□□□□□ -1.79
CSDE1-208ENST00000524652 CDK12Q9NYV4 1490 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-208ENST00000524652 SIPA1L3O60292 1781 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-208ENST00000524652 SCN11AQ9UI33 1791 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 ATRNO75882 1429 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 NCAPD2Q15021 1401 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 MASP2O00187 686 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 FOSP01100 380 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-208ENST00000524652 CANXP27824 592 aaKnown RBP3.89□□□□□ -1.79
CSDE1-208ENST00000524652 CD38P28907 300 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 PPP2R1AP30153 589 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 HOXC9P31274 260 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 FOXI1Q12951 378 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 RESTQ13127 1097 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 ADRM1Q16186 407 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 ANO4Q32M45 955 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 PRR16Q569H4 304 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 HSP90AB2PQ58FF8 381 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 Q6ZVL8 140 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 DDX46Q7L014 1031 aaKnown RBP3.89□□□□□ -1.79
CSDE1-208ENST00000524652 THNSL2Q86YJ6 484 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 MAPKAPK5Q8IW41 473 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 OR56A1Q8NGH5 318 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 TSPEARQ8WU66 669 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 ASB10Q8WXI3 467 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 NELL1Q92832 810 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 FUBP1Q96AE4 644 aaKnown RBP3.89□□□□□ -1.79
CSDE1-208ENST00000524652 REXO4Q9GZR2 422 aaKnown RBP3.89□□□□□ -1.79
CSDE1-208ENST00000524652 PRKRIP1Q9H875 184 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-208ENST00000524652 KLHL11Q9NVR0 708 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 MOCS1Q9NZB8 636 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 RNF181Q9P0P0 153 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 EDARQ9UNE0 448 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 INSL6Q9Y581 213 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 DOT1LQ8TEK3 1739 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 MAST3O60307 1309 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 AFF2P51816 1311 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 RTL1A6NKG5 1358 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 ATRNL1Q5VV63 1379 aa3.89□□□□□ -1.79
CSDE1-208ENST00000524652 BLMP54132 1417 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-208ENST00000524652 BRINP1O60477 761 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 ESRRBO95718 433 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 ITGAMP11215 1152 aa3.88□□□□□ -1.79
CSDE1-208ENST00000524652 FDXRP22570 491 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms