RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 MYLK4Q86YV6 388 aaPredicted RBP7.09□□□□□ -1.27
SKP1-213ENST00000524288 ZNF808Q8N4W9 903 aaPredicted RBP7.09□□□□□ -1.27
SKP1-213ENST00000524288 MAML1Q92585 1016 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 EXTL1Q92935 676 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 PACSIN1Q9BY11 444 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 TRIM54Q9BYV2 358 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 AGO3Q9H9G7 860 aaKnown RBP7.09□□□□□ -1.27
SKP1-213ENST00000524288 LRCH1Q9Y2L9 728 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 HS3ST3A1Q9Y663 406 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 ISM1B1AKI9 464 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 APOL1O14791 398 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 IL18RAPO95256 599 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 HARSP12081 509 aaKnown RBP7.08□□□□□ -1.28
SKP1-213ENST00000524288 EN2P19622 333 aaPredicted RBP7.08□□□□□ -1.28
SKP1-213ENST00000524288 HALP42357 657 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 MRPL49Q13405 166 aaKnown RBP7.08□□□□□ -1.28
SKP1-213ENST00000524288 IZUMO3Q5VZ72 239 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 CCDC174Q6PII3 467 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 C1orf210Q8IVY1 113 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 ANKRD42Q8N9B4 389 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 OR6B3Q8NGW1 331 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 EVI5LQ96CN4 794 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 TMEM176AQ96HP8 235 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 WDR12Q9GZL7 423 aaKnown RBP7.08□□□□□ -1.28
SKP1-213ENST00000524288 STARD7Q9NQZ5 370 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.08□□□□□ -1.28
SKP1-213ENST00000524288 COL20A1Q9P218 1284 aa7.08□□□□□ -1.28
SKP1-213ENST00000524288 AFF4Q9UHB7 1163 aaKnown RBP7.08□□□□□ -1.28
SKP1-213ENST00000524288 PRSS29PA6NIE9 313 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 ZNF785A8K8V0 405 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 TMEM233B4DJY2 109 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 NPIPB8E9PQR5 432 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 SUV39H1O43463 412 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 PIP5K1CO60331 668 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 GJB1P08034 283 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 MTHFD1P11586 935 aaKnown RBP7.07□□□□□ -1.28
SKP1-213ENST00000524288 HIBADHP31937 336 aaKnown RBP7.07□□□□□ -1.28
SKP1-213ENST00000524288 ABHD18Q0P651 414 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 SLC13A2Q13183 592 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 OTUD7BQ6GQQ9 843 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 ZNF783Q6ZMS7 281 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 SEM1Q6ZVN7 128 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 D2HGDHQ8N465 521 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 RNF169Q8NCN4 708 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 TCF25Q9BQ70 676 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 NDC1Q9BTX1 674 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 UNKQ9C0B0 810 aaKnown RBP7.07□□□□□ -1.28
SKP1-213ENST00000524288 ZNF703Q9H7S9 590 aaPredicted RBP7.07□□□□□ -1.28
SKP1-213ENST00000524288 BRD9Q9H8M2 597 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 GNL3LQ9NVN8 582 aaKnown RBP7.07□□□□□ -1.28
SKP1-213ENST00000524288 FBXO34Q9NWN3 711 aa7.07□□□□□ -1.28
SKP1-213ENST00000524288 MORC2Q9Y6X9 1032 aaPredicted RBP7.07□□□□□ -1.28
SKP1-213ENST00000524288 PNPLA7Q6ZV29 1317 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 CCDC189A1A4V9 331 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 BTN3A1O00481 513 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 BTKQ06187 659 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 GGT6Q6P531 493 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 MPP5Q8N3R9 675 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 AMER2Q8N7J2 671 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 RNF152Q8N8N0 203 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 IL17DQ8TAD2 202 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 CACTINQ8WUQ7 758 aaKnown RBP7.06□□□□□ -1.28
SKP1-213ENST00000524288 GSTO2Q9H4Y5 243 aa7.06□□□□□ -1.28
SKP1-213ENST00000524288 SIDT1Q9NXL6 827 aaKnown RBP7.06□□□□□ -1.28
SKP1-213ENST00000524288 KLRG2A4D1S0 409 aaPredicted RBP7.05□□□□□ -1.28
SKP1-213ENST00000524288 CDHR4A6H8M9 788 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 PLSCR1O15162 318 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 HOXA3O43365 443 aaPredicted RBP7.05□□□□□ -1.28
SKP1-213ENST00000524288 TBC1D4O60343 1298 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 ZNF202O95125 648 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 UNC5CO95185 931 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 ABHD16AO95870 558 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 SNRPA1P09661 255 aaKnown RBP7.05□□□□□ -1.28
SKP1-213ENST00000524288 RPL17P18621 184 aaKnown RBP7.05□□□□□ -1.28
SKP1-213ENST00000524288 SLC6A2P23975 617 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 MCM7P33993 719 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 ARFIP2P53365 341 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 TNFAIP2Q03169 654 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 KLF10Q13118 480 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 CTBP1Q13363 440 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 LSM12Q3MHD2 195 aaKnown RBP7.05□□□□□ -1.28
SKP1-213ENST00000524288 SGMS1Q86VZ5 419 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 ANKRD35Q8N283 1001 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 IL17RDQ8NFM7 739 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 MYRIPQ8NFW9 859 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 KBTBD7Q8WVZ9 684 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 SUCLG2Q96I99 432 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 PHACTR3Q96KR7 559 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 SMURF2Q9HAU4 748 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 ZDHHC8Q9ULC8 765 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 MED16Q9Y2X0 877 aa7.05□□□□□ -1.28
SKP1-213ENST00000524288 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 CAPN14A8MX76 684 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 M0QYG6 137 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 FOXN3O00409 490 aaPredicted RBP7.04□□□□□ -1.28
SKP1-213ENST00000524288 SLC43A1O75387 559 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 PAX3P23760 479 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 CHKAP35790 457 aa7.04□□□□□ -1.28
SKP1-213ENST00000524288 ZNF135P52742 658 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms