RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 KCNH2Q12809 1159 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SPARCL1Q14515 664 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 KRT33BQ14525 404 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 TRADDQ15628 312 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 KLHL38Q2WGJ6 581 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 IRAK1BP1Q5VVH5 260 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 TWF2Q6IBS0 349 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 ARMCX2Q7L311 632 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 CATSPER4Q7RTX7 472 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 LCA5Q86VQ0 697 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 TRIM69Q86WT6 500 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 NUDCD3Q8IVD9 361 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 RHOT2Q8IXI1 618 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 C12orf50Q8NA57 414 aaPredicted RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.72□□□□□ -1.972e-8■■■■□ 26.6
PCM1-222ENST00000524226 C19orf60Q96EN9 201 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 ANKRD36BP1Q96IX9 119 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 DACH2Q96NX9 599 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 DUSP9Q99956 384 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 TRPV6Q9H1D0 765 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 PPCSQ9HAB8 311 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 ANKEF1Q9NU02 776 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 INTS13Q9NVM9 706 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 GABBR1Q9UBS5 961 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 NR2E1Q9Y466 385 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 L3MBTL1Q9Y468 752 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 ADGRG1Q9Y653 693 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 RPTORQ8N122 1335 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SIPA1L1O43166 1804 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 KIF13BQ9NQT8 1826 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 IGLV3-22A0A075B6J6 115 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 LRRC10BA6NIK2 292 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 H7C0S8 307 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 TLL1O43897 1013 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 HMGCRP04035 888 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SCP2P22307 547 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 NMT1P30419 496 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 CASP2P42575 452 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 TRPC1P48995 793 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 ALDH7A1P49419 539 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 FXR1P51114 621 aaKnown RBP eCLIP2.72□□□□□ -1.973e-6■■■□□ 15.7
PCM1-222ENST00000524226 POLE2P56282 527 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 RNASE9P60153 205 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 PSMC6P62333 389 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 AP2B1P63010 937 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 BASP1P80723 227 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 AP1B1Q10567 949 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 WASHC5Q12768 1159 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 IFT88Q13099 833 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 VGLL4Q14135 290 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 IKBKEQ14164 716 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 RCN2Q14257 317 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 ARHGAP44Q17R89 818 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 MTERF2Q49AM1 385 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SWSAP1Q6NVH7 229 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SCYL2Q6P3W7 929 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 RFX6Q8HWS3 928 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 CYP2W1Q8TAV3 490 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 PARD3BQ8TEW8 1205 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SKA2Q8WVK7 121 aaPredicted RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 SCFD1Q8WVM8 642 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 MAGOHBQ96A72 148 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 PHF21AQ96BD5 680 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 TADA1Q96BN2 335 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 DNAJC19Q96DA6 116 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 C12orf42Q96LP6 360 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 CNBD2Q96M20 576 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 EPAS1Q99814 870 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SH3GL3Q99963 347 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 PDCD2LQ9BRP1 358 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 TRIM62Q9BVG3 475 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SEPT3Q9UH03 358 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 ZNF112Q9UJU3 913 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 PAIP2BQ9ULR5 123 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 PCDHA13Q9Y5I0 950 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SCN9AQ15858 1988 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 KRT87PA6NCN2 255 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 H3BRJ5 948 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 EML1O00423 815 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 NDUFS2O75306 463 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 MYO1DO94832 1006 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 NFASCO94856 1347 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 FGBP02675 491 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 CYBBP04839 570 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SPATA31C1P0DKV0 1188 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 EIF4A3P38919 411 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 PBX1P40424 430 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 MAGEA9P43362 315 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 RECQLP46063 649 aaPredicted RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 AARSP49588 968 aaKnown RBP eCLIP2.72□□□□□ -1.97
PCM1-222ENST00000524226 CARSP49589 748 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 PEX3P56589 373 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 ABCE1P61221 599 aaKnown RBP2.72□□□□□ -1.97
PCM1-222ENST00000524226 CDK17Q00537 523 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 OCRLQ01968 901 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 GUCY2DQ02846 1103 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.72□□□□□ -1.97
PCM1-222ENST00000524226 DOCK1Q14185 1865 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 DGKDQ16760 1214 aa2.72□□□□□ -1.97
PCM1-222ENST00000524226 SGO2Q562F6 1265 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms