RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 TMPRSS9Q7Z410 1059 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 DDX42Q86XP3 938 aaKnown RBP eCLIP3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 SNX19Q92543 992 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 JADE3Q92613 823 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 DMRTA2Q96SC8 542 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 TDP1Q9NUW8 608 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 NR2E3Q9Y5X4 410 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 WNT6Q9Y6F9 365 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 SBNO2Q9Y2G9 1366 aa3.62□□□□□ -1.83
EFCAB13-212ENST00000523842 CCDC195A0A1B0GUA6 201 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 HNRNPCP07910 306 aaKnown RBP eCLIP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 C5AR1P21730 350 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 LPOP22079 712 aaPredicted RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 IARSP41252 1262 aaKnown RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 PHKA1P46020 1223 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 ANXA11P50995 505 aaKnown RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 ZNF844Q08AG5 666 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 EIF2B5Q13144 721 aaKnown RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 PABPC1LQ4VXU2 614 aaKnown RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 SPATS2Q86XZ4 545 aaKnown RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 CBARPQ8N350 705 aaPredicted RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 B3GALNT2Q8NCR0 500 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 NLGN4YQ8NFZ3 816 aaPredicted RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 ATL2Q8NHH9 583 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 RFKQ969G6 155 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 PGBD1Q96JS3 809 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 QTRT1Q9BXR0 403 aaKnown RBP3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 PCDHB1Q9Y5F3 818 aa3.61□□□□□ -1.83
EFCAB13-212ENST00000523842 LRRC14BA6NHZ5 514 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PCDHGA12O60330 932 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 NDUFS2O75306 463 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 VPS4BO75351 444 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 SLC43A1O75387 559 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 MT-CO1P00395 513 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 EBLN1P0CF75 366 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 JUPP14923 745 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PCSK6P29122 969 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 NPTX2P47972 431 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 CDKN1CP49918 316 aaPredicted RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PSMC1P62191 440 aaKnown RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 SSBP2P81877 361 aaPredicted RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 EZH2Q15910 746 aaKnown RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 INAVAQ3KP66 663 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 SUPT20HL1Q3ZLR7 823 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 ZNF365Q70YC5 407 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 FAM9AQ8IZU1 332 aaPredicted RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 CNTD1Q8N815 330 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 IL17RDQ8NFM7 739 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 ZNF48Q96MX3 618 aaPredicted RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 CAMKK2Q96RR4 588 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 TRIB1Q96RU8 372 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 VRK1Q99986 396 aaPredicted RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PACSIN1Q9BY11 444 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 JKAMPQ9P055 326 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 SERPINB13Q9UIV8 391 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PADI4Q9UM07 663 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 AGAP1Q9UPQ3 857 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PRKAB1Q9Y478 270 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PCDHGA9Q9Y5G4 932 aaKnown RBP3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PCDHGA8Q9Y5G5 932 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PCDHGA7Q9Y5G6 932 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PCDHGA6Q9Y5G7 932 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 PCDHGA3Q9Y5H0 932 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 CADPSQ9ULU8 1353 aa3.6□□□□□ -1.83
EFCAB13-212ENST00000523842 CCDC151A5D8V7 595 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 CCDC154A6NI56 674 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 PRSS29PA6NIE9 313 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 PROB1E7EW31 1015 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 F5H697 171 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 K7ESF4 209 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 HTRA2O43464 458 aaPredicted RBP3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 MTHFD1P11586 935 aaKnown RBP3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 DRD4P21917 467 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 EVA1CP58658 441 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 SP2Q02086 613 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 GRM1Q13255 1194 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 KLF1Q13351 362 aaPredicted RBP3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 ACAP2Q15057 778 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 NBPF8Q3BBV2 869 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 VPS53Q5VIR6 699 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 RNF219Q5W0B1 726 aaPredicted RBP3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 C11orf87Q6NUJ2 197 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 PGM2L1Q6PCE3 622 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 SLC2A7Q6PXP3 512 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 PTF1AQ7RTS3 328 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 CLPTM1LQ96KA5 538 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 MRGPRX4Q96LA9 322 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 TPSD1Q9BZJ3 242 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 AMBRA1Q9C0C7 1298 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 CCDC8Q9H0W5 538 aaPredicted RBP3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 SERHLQ9NQF3 203 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 KLC4Q9NSK0 619 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 ATP8A1Q9Y2Q0 1164 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 IPPQ9Y573 584 aa3.59□□□□□ -1.83
EFCAB13-212ENST00000523842 A0A0B4J269 797 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 LINC01548A6NM66 108 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 SMIM22K7EJ46 135 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 FZD9O00144 591 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 POLRMTO00411 1230 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms