RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	IQSEC1	Q6DN90	963 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	KCNK18	Q7Z418	384 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	CMTR2	Q8IYT2	770 aa	Known RBP	5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	SPICE1	Q8N0Z3	855 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	GPR156	Q8NFN8	814 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	PJA1	Q8NG27	643 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	ACAP3	Q96P50	834 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	SLC2A13	Q96QE2	648 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	IFT122	Q9HBG6	1241 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	DKK2	Q9UBU2	259 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	TAGLN3	Q9UI15	199 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	ANKRD6	Q9Y2G4	727 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	MAST1	Q9Y2H9	1570 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	ATRNL1	Q5VV63	1379 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655		B5MCH6	92 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	FGA	P02671	866 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	IFIT2	P09913	472 aa	Known RBP	5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	CT47B1	P0C2W7	299 aa	Predicted RBP	5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	OSM	P13725	252 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	FPR1	P21462	350 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	HTR3A	P46098	478 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	GBX1	Q14549	363 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	GPR162	Q16538	588 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.79	□□□□□ -1.48
SREK1-213	ENST00000523655		Q6YL49	198 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	UNC5CL	Q8IV45	518 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	CPA6	Q8N4T0	437 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	AUTS2	Q8WXX7	1259 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	TIFA	Q96CG3	184 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	RAX2	Q96IS3	184 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	CRAMP1	Q96RY5	1269 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	DCLRE1C	Q96SD1	692 aa	Known RBP	5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	MYOC	Q99972	504 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	ZSWIM1	Q9BR11	485 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	TERF2IP	Q9NYB0	399 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	USP25	Q9UHP3	1055 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	SCOC	Q9UIL1	159 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	PACSIN3	Q9UKS6	424 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	PTCH1	Q13635	1447 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	PLXNC1	O60486	1568 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	SAMD9L	Q8IVG5	1584 aa		5.79	□□□□□ -1.48
SREK1-213	ENST00000523655	BRWD3	Q6RI45	1802 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	ANO9	A1A5B4	782 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	B3GALT2	O43825	422 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	PRSS23	O95084	383 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	SNUPN	O95149	360 aa	Known RBP	5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	NUDT3	O95989	172 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	GAST	P01350	101 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	ELANE	P08246	267 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	MYBL2	P10244	700 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	PF4V1	P10720	104 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	PHKG2	P15735	406 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	SLC6A2	P23975	617 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	CRHR1	P34998	444 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	SREBF1	P36956	1147 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	IARS	P41252	1262 aa	Known RBP	5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	RECQL	P46063	649 aa	Predicted RBP	5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	GPR3	P46089	330 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	FLT3LG	P49771	235 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	KRT85	P78386	507 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	REST	Q13127	1097 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	KLF1	Q13351	362 aa	Predicted RBP	5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	GTF2H3	Q13889	308 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	SEPT2	Q15019	361 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	NOMO1	Q15155	1222 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	FAM47A	Q5JRC9	791 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	AFMID	Q63HM1	303 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	IL31	Q6EBC2	164 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	ZNF575	Q86XF7	245 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	UBE2Q2	Q8WVN8	375 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	ASB10	Q8WXI3	467 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	PPM1E	Q8WY54	764 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	CYP4F11	Q9HBI6	524 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	PNMA2	Q9UL42	364 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	INTU	Q9ULD6	942 aa		5.78	□□□□□ -1.48
SREK1-213	ENST00000523655	NCOA3	Q9Y6Q9	1424 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	WDHD1	O75717	1129 aa	Predicted RBP	5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	SPDEF	O95238	335 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	RAP2A	P10114	183 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	RBP3	P10745	1247 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	ALOX15	P16050	662 aa	Predicted RBP	5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	LPO	P22079	712 aa	Predicted RBP	5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	CCND1	P24385	295 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	CYP2C19	P33261	490 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	NEK3	P51956	506 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	CLRN1	P58418	232 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	MRPS9	P82933	396 aa	Known RBP	5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	PICALM	Q13492	652 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	TSHZ3	Q63HK5	1081 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	MED25	Q71SY5	747 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	PDZD4	Q76G19	769 aa	Predicted RBP	5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	ARHGEF19	Q8IW93	802 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	PQLC1	Q8N2U9	271 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	OR7D4	Q8NG98	312 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	OR2I1P	Q8NGU4	316 aa		5.77	□□□□□ -1.49
SREK1-213	ENST00000523655	ORAI2	Q96SN7	254 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms