RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 SLC9A9Q8IVB4 645 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 MAGEB6Q8N7X4 407 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 DUS3LQ96G46 650 aaKnown RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 NSL1Q96IY1 281 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 SNX27Q96L92 541 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 PSD2Q9BQI7 771 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 SIKE1Q9BRV8 207 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ASTN1O14525 1302 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 FAM170AA1A519 330 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 FAM196BA6NMK8 535 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 PRKAB2O43741 272 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ADRA2BP18089 450 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 RPL5P46777 297 aaKnown RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 DDB1Q16531 1140 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ANKRD20A4Q4UJ75 823 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 TAF1BQ53T94 588 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 CCDC80Q76M96 950 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ANKRD35Q8N283 1001 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ZNF641Q96N77 438 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 CYTH2Q99418 400 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 KLC2Q9H0B6 622 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ARL8BQ9NVJ2 186 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 ARPP21Q9UBL0 812 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 RAB26Q9ULW5 256 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 PTPN22Q9Y2R2 807 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 TTLL3Q9Y4R7 772 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 MYPNQ86TC9 1320 aa8.85□□□□□ -0.99
CSMD1-213ENST00000523488 BAZ2BQ9UIF8 2168 aaKnown RBP8.85□□□□□ -0.99
CSMD1-213ENST00000523488 CIB2O75838 187 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 SNHG28P0DPA3 235 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 GZMAP12544 262 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 SOX5P35711 763 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 CHKAP35790 457 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ERFP50548 548 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 SPIRE1Q08AE8 756 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 KCNH2Q12809 1159 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 DNAJC3Q13217 504 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 IFIT5Q13325 482 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 LRRC41Q15345 812 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 KYNUQ16719 465 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 RWDD4Q6NW29 188 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 CCDC62Q6P9F0 684 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 FBXL19Q6PCT2 694 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 NLRP9Q7RTR0 991 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ZNF410Q86VK4 478 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 SNF8Q96H20 258 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TCHPQ9BT92 498 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 UNKQ9C0B0 810 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ANKRD2Q9GZV1 360 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 STN1Q9H668 368 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TUBA8Q9NY65 449 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 SPATA7Q9P0W8 599 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 MTO1Q9Y2Z2 717 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 PARP14Q460N5 1801 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ERVV-1B6SEH8 477 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 PLCG2P16885 1265 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 PRDX6P30041 224 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 GALNT2Q10471 571 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TEX44Q53QW1 395 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TMPRSS6Q8IU80 811 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 BANPQ8N9N5 519 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 RASGRP4Q8TDF6 673 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 DQX1Q8TE96 717 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 EFHD2Q96C19 240 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 VPS50Q96JG6 964 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 C7orf26Q96N11 449 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TTC1Q99614 292 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 FGFBP2Q9BYJ0 223 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 RIOX1Q9H6W3 641 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 DNAJC18Q9H819 358 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 CLIC5Q9NZA1 410 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 FAF1Q9UNN5 650 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ATF5Q9Y2D1 282 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 CFAP69A5D8W1 941 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TMEM247A6NEH6 219 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 GPR25O00155 361 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 EIF3DO15371 548 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 THAP12O43422 761 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 CBFA2T3O75081 653 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ABCB4P21439 1286 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 HOXD12P35452 270 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ARSHQ5FYA8 562 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ZNF362Q5T0B9 420 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 KLHDC10Q6PID8 442 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 IZUMO2Q6UXV1 221 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 LDHAL6AQ6ZMR3 332 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 NLRP10Q86W26 655 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 RBM15BQ8NDT2 890 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 GLIS3Q8NEA6 775 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 OR6Y1Q8NGX8 325 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 RIN3Q8TB24 985 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 ARHGEF26Q96DR7 871 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 FNBP1Q96RU3 617 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TRAIPQ9BWF2 469 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 OSBPL8Q9BZF1 889 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 KANSL2Q9H9L4 492 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 TYW1Q9NV66 732 aaKnown RBP8.84□□□□□ -0.99
CSMD1-213ENST00000523488 FAM32AQ9Y421 112 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms