RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 A0A087WUV0 522 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 STRNO43815 780 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 KRT38O76015 456 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 APRTP07741 180 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 RBP3P10745 1247 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 PPP2R2AP63151 447 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 COG7P83436 770 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 HIF1AQ16665 826 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 TRIM42Q8IWZ5 723 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 ATP11CQ8NB49 1132 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 EPHB6O15197 1021 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZC3H11AO75152 810 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 OR1G1P47890 313 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 SESN2P58004 480 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 TPI1P60174 286 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 BYSLQ13895 437 aaKnown RBP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 SPARCL1Q14515 664 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 DCAF4L1Q3SXM0 396 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 SLC13A5Q86YT5 568 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 AGAP3Q96P47 875 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 GCNAQ96QF7 691 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 CAMKK2Q96RR4 588 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 RBM15Q96T37 977 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 RAB6BQ9NRW1 208 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 AIPL1Q9NZN9 384 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 BFARQ9NZS9 450 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 DMGDHQ9UI17 866 aaKnown RBP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 B3GAT3O94766 335 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 APOEP02649 317 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 PMLP29590 882 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 KAT5Q92993 513 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 CCDC160A6NGH7 325 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 GZMAP12544 262 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 YY1P25490 414 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 GRIK4Q16099 956 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 EPM2AIP1Q7L775 607 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 MAP4K3Q8IVH8 894 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 ATG4AQ8WYN0 398 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 ERP44Q9BS26 406 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 SIK3Q9Y2K2 1263 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 RIPK3Q9Y572 518 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 GPD1P21695 349 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 PCSK1P29120 753 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 GJC2Q5T442 439 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 EFCAB13Q8IY85 973 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 SPATA18Q8TC71 538 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 MED15Q96RN5 788 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 EPAS1Q99814 870 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 VPS11Q9H270 941 aa13.76□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZFXP17010 805 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 ITGB3BPQ13352 177 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 PPIL2Q13356 520 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 KLHL38Q2WGJ6 581 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 PAPD7Q5XG87 772 aaKnown RBP13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 TRAIPQ9BWF2 469 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 MAP3K6O95382 1288 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 HMBSP08397 361 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 DEUP1Q05D60 604 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 KCNT1Q5JUK3 1230 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 RNF180Q86T96 592 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 WDR49Q8IV35 697 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 CFAP61Q8NHU2 1237 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 KLHL29Q96CT2 875 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 IKZF4Q9H2S9 585 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 DFFAO00273 331 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 DDX3XO00571 662 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 DLG4P78352 724 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 TMPRSS15P98073 1019 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 DNAJB3Q8WWF6 145 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 MAML1Q92585 1016 aa13.75□□□□□ -0.21
PCDHGB1-201ENST00000523390 A0A0U1RQJ8 604 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 PEX10O60683 326 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 SASH3O75995 380 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 GUCY1A3Q02108 690 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 NPY5RQ15761 445 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 EMC1Q8N766 993 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 EXT2Q93063 718 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 RSRC1Q96IZ7 334 aaKnown RBP13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ASTN1O14525 1302 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 PDE4DIPQ5VU43 2346 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ATP9BO43861 1147 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 SPAG7O75391 227 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 TPD52P55327 224 aaPredicted RBP13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 KYNUQ16719 465 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 UGCGQ16739 394 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 TREML2Q5T2D2 321 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 KDELC2Q7Z4H8 507 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 SPATA20Q8TB22 786 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 SLC7A14Q8TBB6 771 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms