RNA–Protein interactions for RNA: ENST00000522771.6

MEG3-220, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 6,984 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-220ENST00000522771 HORMAD1Q86X24 394 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 CCDC103Q8IW40 242 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 RBBP8NLQ8NC74 664 aaPredicted RBP11.33□□□□□ -0.6
MEG3-220ENST00000522771 CDY2AQ9Y6F7 541 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 CDY1Q9Y6F8 540 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 SUPT3HB4E1H0 165 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 RALAP11233 206 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 PDGFRAP16234 1089 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 TTC39CQ8N584 583 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 TSPAN17Q96FV3 270 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 FAM111AQ96PZ2 611 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 SCN3BQ9NY72 215 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 IL1RAPL1Q9NZN1 696 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 PRR23D1E9PI22 279 aaPredicted RBP11.33□□□□□ -0.6
MEG3-220ENST00000522771 PRR23D2P0DMB1 279 aaPredicted RBP11.33□□□□□ -0.6
MEG3-220ENST00000522771 KCNMA1Q12791 1236 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 TRIM16LQ309B1 348 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 KLHDC7AQ5VTJ3 777 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 NAIF1Q69YI7 327 aaPredicted RBP11.33□□□□□ -0.6
MEG3-220ENST00000522771 GPR141Q7Z602 305 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 APLFQ8IW19 511 aaPredicted RBP11.33□□□□□ -0.6
MEG3-220ENST00000522771 FAM71DQ8N9W8 422 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
MEG3-220ENST00000522771 PAK5Q9P286 719 aa11.33□□□□□ -0.6
MEG3-220ENST00000522771 NFIBO00712 420 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 DLGAP3O95886 979 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 AKR1B1P15121 316 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 HSPA13P48723 471 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 PRUNE1Q86TP1 453 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 PPIL6Q8IXY8 311 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 DDHD1Q8NEL9 900 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 BRD8Q9H0E9 1235 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 GRAP2O75791 330 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 CDK17Q00537 523 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 WNK4Q96J92 1243 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 AP3B1O00203 1094 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 PSMD3O43242 534 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 FKBP9O95302 570 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 KRT16P08779 473 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 OCM2P0CE71 109 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 OCMP0CE72 109 aaPredicted RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 NCOA4Q13772 614 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 AARS2Q5JTZ9 985 aaKnown RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 FKBP9P1Q75LS8 142 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 ARID3BQ8IVW6 561 aaPredicted RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 SYN2Q92777 582 aaPredicted RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 PABPC3Q9H361 631 aaKnown RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 C10orf88Q9H8K7 445 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 TET3O43151 1660 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 SPAG6O75602 509 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 GNAT1P11488 350 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 SPRP35270 261 aaPredicted RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 HSD17B4P51659 736 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 LRRC74AQ0VAA2 488 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 CEP78Q5JTW2 689 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 CCDC60Q8IWA6 550 aaPredicted RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 PREX2Q70Z35 1606 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 USP1O94782 785 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 ALBP02768 609 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 SERPINB5P36952 375 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 SF3B3Q15393 1217 aaKnown RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 CCDC142Q17RM4 750 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 BTBD8Q5XKL5 378 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 PCSK7Q16549 785 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 ACCSLQ4AC99 568 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 THEMIS2Q5TEJ8 643 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 SCUBE1Q8IWY4 988 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 ENGASEQ8NFI3 743 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 SPATA33Q96N06 139 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 SH3GL2Q99962 352 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 HOXC10Q9NYD6 342 aa11.32□□□□□ -0.6
MEG3-220ENST00000522771 FAM32AQ9Y421 112 aaKnown RBP11.32□□□□□ -0.6
MEG3-220ENST00000522771 CLTCL1P53675 1640 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 SH3KBP1Q96B97 665 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 NMD3Q96D46 503 aaKnown RBP11.31□□□□□ -0.6
MEG3-220ENST00000522771 SKAP2O75563 359 aaPredicted RBP11.31□□□□□ -0.6
MEG3-220ENST00000522771 ZNF189O75820 626 aaPredicted RBP11.31□□□□□ -0.6
MEG3-220ENST00000522771 POLBP06746 335 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 IREB2P48200 963 aaKnown RBP11.31□□□□□ -0.6
MEG3-220ENST00000522771 MEI1Q5TIA1 1274 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 IYDQ6PHW0 289 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 SETD3Q86TU7 594 aaPredicted RBP11.31□□□□□ -0.6
MEG3-220ENST00000522771 OTUB1Q96FW1 271 aaPredicted RBP11.31□□□□□ -0.6
MEG3-220ENST00000522771 EXOSC4Q9NPD3 245 aaKnown RBP11.31□□□□□ -0.6
MEG3-220ENST00000522771 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 EFCAB14O75071 495 aa11.31□□□□□ -0.6
MEG3-220ENST00000522771 HERVK_113P62684 666 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms