RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 PLEKHA4Q9H4M7 779 aa23.63■■□□□ 1.37
HOXA3-205ENST00000522456 PCDHB8Q9UN66 801 aa23.63■■□□□ 1.37
HOXA3-205ENST00000522456 NR3C1P04150 777 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 PAX3P23760 479 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 CYP24A1Q07973 514 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 LMBRD2Q68DH5 695 aaPredicted RBP23.62■■□□□ 1.37
HOXA3-205ENST00000522456 ISM2Q6H9L7 571 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 CYP26C1Q6V0L0 522 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 CMASQ8NFW8 434 aaPredicted RBP23.62■■□□□ 1.37
HOXA3-205ENST00000522456 CCDC127Q96BQ5 260 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 ANKRD36BP1Q96IX9 119 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 FNBP1Q96RU3 617 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 DMAC2Q9NW81 257 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 MTRRQ9UBK8 725 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 TRAF3IP3Q9Y228 551 aa23.62■■□□□ 1.37
HOXA3-205ENST00000522456 H7C4K7 107 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 M0QZQ0 153 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 TGM5O43548 720 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 TNNC2P02585 160 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 ITGB3P05106 788 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 DLATP10515 647 aaKnown RBP23.61■■□□□ 1.37
HOXA3-205ENST00000522456 TNNI1P19237 187 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 OR1D2P34982 312 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 TDGQ13569 410 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 PSMD6Q15008 389 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 DUOXA2Q1HG44 320 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 SLC9A9Q8IVB4 645 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 CSGALNACT2Q8N6G5 542 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 C1orf127Q8N9H9 656 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 FAM84AQ96KN4 292 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 GBP4Q96PP9 640 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 RHOBTB2Q9BYZ6 727 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 GTPBP4Q9BZE4 634 aaKnown RBP23.61■■□□□ 1.37
HOXA3-205ENST00000522456 MTMR12Q9C0I1 747 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 INTS13Q9NVM9 706 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 ITGA11Q9UKX5 1188 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 AGAP1Q9UPQ3 857 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 R3HCC1Q9Y3T6 440 aaKnown RBP23.61■■□□□ 1.37
HOXA3-205ENST00000522456 TIMM13Q9Y5L4 95 aaPredicted RBP23.61■■□□□ 1.37
HOXA3-205ENST00000522456 BACE2Q9Y5Z0 518 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 CDY1Q9Y6F8 540 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 PLXNA3P51805 1871 aa23.61■■□□□ 1.37
HOXA3-205ENST00000522456 SPTLC1O15269 473 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 ADAM12O43184 909 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 KRT19P08727 400 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 POLR2BP30876 1174 aaKnown RBP23.6■■□□□ 1.37
HOXA3-205ENST00000522456 PRCPP42785 496 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 AARSP49588 968 aaKnown RBP eCLIP23.6■■□□□ 1.37
HOXA3-205ENST00000522456 TAF6P49848 677 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 CLCN5P51795 746 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 MYBPC2Q14324 1141 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 CEP135Q66GS9 1140 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 WDR49Q8IV35 697 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 OR5B17Q8NGF7 314 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 TMEM174Q8WUU8 243 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 SENP8Q96LD8 212 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 KCNK12Q9HB15 430 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 DUSP12Q9UNI6 340 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 FRMD4BQ9Y2L6 1034 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 VWA8A3KMH1 1905 aa23.6■■□□□ 1.37
HOXA3-205ENST00000522456 PTPRJQ12913 1337 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 PROB1E7EW31 1015 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 RBP5P82980 135 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 YWHAHQ04917 246 aaPredicted RBP23.59■■□□□ 1.37
HOXA3-205ENST00000522456 MRPL58Q14197 206 aaKnown RBP23.59■■□□□ 1.37
HOXA3-205ENST00000522456 SV2CQ496J9 727 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 CTXN3Q4LDR2 81 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 CWF19L1Q69YN2 538 aaKnown RBP23.59■■□□□ 1.37
HOXA3-205ENST00000522456 LILRA6Q6PI73 481 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 RSPO2Q6UXX9 243 aaPredicted RBP23.59■■□□□ 1.37
HOXA3-205ENST00000522456 USP37Q86T82 979 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 FLCNQ8NFG4 579 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 ZNF560Q96MR9 790 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 ZDHHC7Q9NXF8 308 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 MAN1B1Q9UKM7 699 aa23.59■■□□□ 1.37
HOXA3-205ENST00000522456 CFAP54Q96N23 3096 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 CCDC195A0A1B0GUA6 201 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 ARHGEF37A1IGU5 675 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 KPNA7A9QM74 516 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 ODC1P11926 461 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 NR2F2P24468 414 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 RPL13P26373 211 aaKnown RBP23.58■■□□□ 1.37
HOXA3-205ENST00000522456 PNPLA4P41247 253 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 CASP4P49662 377 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 ARPP19P56211 112 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 RAB33AQ14088 237 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 CAMK4Q16566 473 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 CGRRF1Q99675 332 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 WDR6Q9NNW5 1121 aaKnown RBP23.58■■□□□ 1.37
HOXA3-205ENST00000522456 IGSF9Q9P2J2 1179 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 FBXW11Q9UKB1 542 aa23.58■■□□□ 1.37
HOXA3-205ENST00000522456 CLUHO75153 1309 aa23.58■■□□□ 1.36
HOXA3-205ENST00000522456 CYB561D2O14569 222 aa23.57■■□□□ 1.36
HOXA3-205ENST00000522456 N4BP1O75113 896 aaKnown RBP23.57■■□□□ 1.36
HOXA3-205ENST00000522456 ADAM9Q13443 819 aa23.57■■□□□ 1.36
HOXA3-205ENST00000522456 COBLL1Q53SF7 1204 aa23.57■■□□□ 1.36
HOXA3-205ENST00000522456 LIN9Q5TKA1 542 aa23.57■■□□□ 1.36
HOXA3-205ENST00000522456 ZNF280DQ6N043 979 aa23.57■■□□□ 1.36
HOXA3-205ENST00000522456 FBXL5Q9UKA1 691 aa23.57■■□□□ 1.36
HOXA3-205ENST00000522456 FBXL21Q9UKT6 434 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms