RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZNF197O14709 1029 aa22.4■■□□□ 1.18
SDCBP-209ENST00000522243 PPP6R2O75170 966 aa22.4■■□□□ 1.18
SDCBP-209ENST00000522243 DCNP07585 359 aaKnown RBP22.4■■□□□ 1.18
SDCBP-209ENST00000522243 HSP90AA1P07900 732 aaKnown RBP22.4■■□□□ 1.18
SDCBP-209ENST00000522243 GPR17Q13304 367 aa22.4■■□□□ 1.18
SDCBP-209ENST00000522243 TANGO2Q6ICL3 276 aa22.4■■□□□ 1.18
SDCBP-209ENST00000522243 SPRYD3Q8NCJ5 442 aa22.4■■□□□ 1.18
SDCBP-209ENST00000522243 NOC3LQ8WTT2 800 aaKnown RBP22.4■■□□□ 1.18
SDCBP-209ENST00000522243 OXCT2Q9BYC2 517 aaPredicted RBP22.4■■□□□ 1.18
SDCBP-209ENST00000522243 FOXQ1Q9C009 403 aa22.4■■□□□ 1.18
SDCBP-209ENST00000522243 MAFFQ9ULX9 164 aa22.4■■□□□ 1.18
SDCBP-209ENST00000522243 PHLDB3Q6NSJ2 640 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 ARMCX5Q6P1M9 558 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 CCDC65Q8IXS2 484 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 ATAD1Q8NBU5 361 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 OR10T2Q8NGX3 314 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 HPS3Q969F9 1004 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 DHX58Q96C10 678 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 PYM1Q9BRP8 204 aaKnown RBP22.39■■□□□ 1.17
SDCBP-209ENST00000522243 PCIF1Q9H4Z3 704 aa22.39■■□□□ 1.17
SDCBP-209ENST00000522243 MTMR11A4FU01 709 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 CYB561D2O14569 222 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 MOSPD3O75425 235 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 ECI2O75521 394 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 IL18RAPO95256 599 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 TAF6P49848 677 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 MYBPC2Q14324 1141 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 ANGPT1Q15389 498 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 E2F4Q16254 413 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 SLC44A4Q53GD3 710 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 FAM78AQ5JUQ0 283 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 CENPPQ6IPU0 288 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 SHC4Q6S5L8 630 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 TTC9BQ8N6N2 239 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 GLIS3Q8NEA6 775 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 ZSWIM3Q96MP5 696 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 CBWD1Q9BRT8 395 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 ASAH2Q9NR71 780 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 SIT1Q9Y3P8 196 aa22.38■■□□□ 1.17
SDCBP-209ENST00000522243 CUTAO60888 179 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 LRRN2O75325 713 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 SOAT2O75908 522 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 YEATS4O95619 227 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 ZSCAN22P10073 491 aaPredicted RBP22.37■■□□□ 1.17
SDCBP-209ENST00000522243 PAX3P23760 479 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 STARD6P59095 220 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 TFAMQ00059 246 aaKnown RBP22.37■■□□□ 1.17
SDCBP-209ENST00000522243 POU5F1Q01860 360 aaKnown RBP22.37■■□□□ 1.17
SDCBP-209ENST00000522243 ALCAMQ13740 583 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 GRM2Q14416 872 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 MLF2Q15773 248 aaPredicted RBP22.37■■□□□ 1.17
SDCBP-209ENST00000522243 BRSK2Q8IWQ3 736 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 FAM84AQ96KN4 292 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 DNAJC25Q9H1X3 360 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 TNMDQ9H2S6 317 aa22.37■■□□□ 1.17
SDCBP-209ENST00000522243 GFRA3O60609 400 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 LDHAP00338 332 aaKnown RBP22.36■■□□□ 1.17
SDCBP-209ENST00000522243 F13A1P00488 732 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 CYP11A1P05108 521 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 GARTP22102 1010 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 FCARP24071 287 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 ALDH1A3P47895 512 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 EPHB3P54753 998 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 EPHA5P54756 1037 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 TEAD2Q15562 447 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 WSCD1Q658N2 575 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 SCARA3Q6AZY7 606 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 METTL23Q86XA0 190 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 ELSPBP1Q96BH3 223 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 BORCS6Q96GS4 357 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 SHDQ96IW2 340 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 ZFP14Q9HCL3 533 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 KBTBD4Q9NVX7 518 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 RBAKQ9NYW8 714 aaPredicted RBP22.36■■□□□ 1.17
SDCBP-209ENST00000522243 DSEQ9UL01 958 aa22.36■■□□□ 1.17
SDCBP-209ENST00000522243 MIA3Q5JRA6 1907 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 KPNA7A9QM74 516 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 MICAL2O94851 1124 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 CD72P21854 359 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 POLR2BP30876 1174 aaKnown RBP22.35■■□□□ 1.17
SDCBP-209ENST00000522243 ASIC1P78348 528 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 PFKPQ01813 784 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 PLD1Q13393 1074 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 PKP1Q13835 747 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 SV2CQ496J9 727 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 SLC39A12Q504Y0 691 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 FRMD5Q7Z6J6 570 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 NT5DC4Q86YG4 428 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 LEMD2Q8NC56 503 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 PJA1Q8NG27 643 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 SHKBP1Q8TBC3 707 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 ASB16Q96NS5 453 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 LRRC3Q9BY71 257 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 TRIM9Q9C026 710 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 LRRC27Q9C0I9 530 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 ZCWPW1Q9H0M4 648 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 TMEM206Q9H813 350 aa22.35■■□□□ 1.17
SDCBP-209ENST00000522243 A0A1W2PRU2 124 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 KANSL1LA0AUZ9 987 aa22.34■■□□□ 1.17
SDCBP-209ENST00000522243 EXTL3O43909 919 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms