RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 RUBCNQ92622 972 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 ACO2Q99798 780 aaKnown RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 BHMT2Q9H2M3 363 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 SEMA4AQ9H3S1 761 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 PRMT8Q9NR22 394 aaPredicted RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 CEP72Q9P209 647 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 BACE2Q9Y5Z0 518 aa12.16□□□□□ -0.46
CSMD1-210ENST00000521646 ZFP37Q9Y6Q3 630 aaPredicted RBP12.16□□□□□ -0.46
CSMD1-210ENST00000521646 E9PMD0 336 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 ARNTLO00327 626 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 OR52Z1P0C646 297 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 PROZP22891 400 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 NPTX2P47972 431 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.46
CSMD1-210ENST00000521646 PRKCQQ04759 706 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 VITQ6UXI7 678 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 DEPTORQ8TB45 409 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 LRRC15Q8TF66 581 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 WASF1Q92558 559 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 LRRC3BQ96PB8 259 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 TARS2Q9BW92 718 aaKnown RBP12.15□□□□□ -0.46
CSMD1-210ENST00000521646 TUBGCP4Q9UGJ1 667 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 KCNH3Q9ULD8 1083 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 TNFSF13BQ9Y275 285 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
CSMD1-210ENST00000521646 USP24Q9UPU5 2620 aa12.15□□□□□ -0.46
CSMD1-210ENST00000521646 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
CSMD1-210ENST00000521646 ARHGEF35A5YM69 484 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 SFI1A8K8P3 1242 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 PODXLO00592 558 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 XYLBO75191 536 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ECI2O75521 394 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 KRT37O76014 449 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 VIPR2P41587 438 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 CDR1P51861 262 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ANAPC15P60006 121 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ZNF528Q3MIS6 628 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 STXBP5Q5T5C0 1151 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 MTSS1LQ765P7 747 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 MAP4K3Q8IVH8 894 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 TTC9BQ8N6N2 239 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ZNF461Q8TAF7 563 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 CCDC43Q96MW1 224 aaKnown RBP12.14□□□□□ -0.47
CSMD1-210ENST00000521646 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 CORO1BQ9BR76 489 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 LRRC3Q9BY71 257 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 C2orf40Q9H1Z8 148 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 AVENQ9NQS1 362 aaPredicted RBP12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 FBXO4Q9UKT5 387 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 KIAA1024Q9UPX6 916 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 INSL5Q9Y5Q6 135 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 CITO14578 2027 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ASPMQ8IZT6 3477 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 TSC2P49815 1807 aa12.14□□□□□ -0.47
CSMD1-210ENST00000521646 ANK1P16157 1881 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 PPEF2O14830 753 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 LAMTOR5O43504 91 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 HIP1RO75146 1068 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 OR4Q2P0C623 313 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 ATF2P15336 505 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 GUCY2FP51841 1108 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 NEK4P51957 841 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
CSMD1-210ENST00000521646 ARPP19P56211 112 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 PEX3P56589 373 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 SPAG1Q07617 926 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 ELAVL2Q12926 359 aaKnown RBP12.13□□□□□ -0.47
CSMD1-210ENST00000521646 SRSF5Q13243 272 aaKnown RBP12.13□□□□□ -0.47
CSMD1-210ENST00000521646 LPAL2Q16609 132 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 SLC10A6Q3KNW5 377 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 DCAF4L1Q3SXM0 396 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 ZBTB41Q5SVQ8 909 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 CCDC83Q8IWF9 413 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 ASB16Q96NS5 453 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 KIF2CQ99661 725 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 HINFPQ9BQA5 517 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 MKNK1Q9BUB5 465 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 BCO2Q9BYV7 579 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 OSBPL6Q9BZF3 934 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 DNAJC25Q9H1X3 360 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 EPC1Q9H2F5 836 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 BRMS1Q9HCU9 246 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 TMPRSS4Q9NRS4 437 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
CSMD1-210ENST00000521646 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
CSMD1-210ENST00000521646 SMG5Q9UPR3 1016 aaKnown RBP12.13□□□□□ -0.47
CSMD1-210ENST00000521646 PCDHB6Q9Y5E3 794 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 WDFY3Q8IZQ1 3526 aa12.13□□□□□ -0.47
CSMD1-210ENST00000521646 KINO60870 393 aaKnown RBP12.12□□□□□ -0.47
CSMD1-210ENST00000521646 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 KCNE1P15382 129 aa12.12□□□□□ -0.47
CSMD1-210ENST00000521646 CCT6AP40227 531 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms