RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SLFN5Q08AF3 891 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 ALDH1L2Q3SY69 923 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 TREML2Q5T2D2 321 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 LARP4Q71RC2 724 aaKnown RBP eCLIP7.12□□□□□ -1.271e-25■□□□□ 9.4
PABPC1-216ENST00000520868 SPRED1Q7Z699 444 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 FILIP1Q7Z7B0 1213 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 ZGPATQ8N5A5 531 aaKnown RBP7.12□□□□□ -1.27
PABPC1-216ENST00000520868 ANKRD13CQ8N6S4 541 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 KIAA1958Q8N8K9 716 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 COA7Q96BR5 231 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 PAWRQ96IZ0 340 aaKnown RBP7.12□□□□□ -1.27
PABPC1-216ENST00000520868 NEUROD6Q96NK8 337 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 KIAA1683Q9H0B3 1180 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 PRO3102Q9H379 93 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 STAP2Q9UGK3 403 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 NOB1Q9ULX3 412 aaKnown RBP7.12□□□□□ -1.27
PABPC1-216ENST00000520868 SLC45A1Q9Y2W3 748 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 VWA7Q9Y334 891 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 GAKO14976 1311 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 CDC14BO60729 498 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 SESN2P58004 480 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-216ENST00000520868 MECOMQ03112 1051 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 TFCP2Q12800 502 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 SPP2Q13103 211 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 NOLC1Q14978 699 aaKnown RBP eCLIP7.11□□□□□ -1.273e-13■■□□□ 11.8
PABPC1-216ENST00000520868 SPTY2D1Q68D10 685 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-216ENST00000520868 SLC17A8Q8NDX2 589 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 MAML3Q96JK9 1138 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 ORAI3Q9BRQ5 295 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.11□□□□□ -1.27
PABPC1-216ENST00000520868 AGTPBP1Q9UPW5 1226 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 ZKSCAN5Q9Y2L8 839 aa7.11□□□□□ -1.27
PABPC1-216ENST00000520868 MROH7-TTC4A0A0A0MT08 1334 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 GPR75-ASB3A0A0A6YYF3 556 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 A0A1B0GUL7 405 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 UBA6A0AVT1 1052 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-216ENST00000520868 DVL2O14641 736 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 MUSKO15146 869 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 FOXS1O43638 330 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 PRLP01236 227 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 RPS19P39019 145 aaKnown RBP7.1□□□□□ -1.27
PABPC1-216ENST00000520868 HMGCS2P54868 508 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 RHBDL3P58872 404 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 SLC6A3Q01959 620 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 RRP1BQ14684 758 aaKnown RBP7.1□□□□□ -1.27
PABPC1-216ENST00000520868 EPHA7Q15375 998 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 TTC38Q5R3I4 469 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 SLFN12LQ6IEE8 588 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 NECAB2Q7Z6G3 386 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 KIF18BQ86Y91 864 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 PALM2Q8IXS6 379 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 DIS3LQ8TF46 1054 aaKnown RBP7.1□□□□□ -1.27
PABPC1-216ENST00000520868 ZNF384Q8TF68 577 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 LPPQ93052 612 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 MEIS3Q99687 375 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 DPYSL5Q9BPU6 564 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.1□□□□□ -1.27
PABPC1-216ENST00000520868 C12orf65Q9H3J6 166 aaKnown RBP7.1□□□□□ -1.27
PABPC1-216ENST00000520868 TMPRSS5Q9H3S3 457 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 FANCLQ9NW38 375 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 RAI14Q9P0K7 980 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 FAM184BQ9ULE4 1060 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 ZMYND8Q9ULU4 1186 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-216ENST00000520868 HDAC5Q9UQL6 1122 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 TESMINQ9Y4I5 508 aa7.1□□□□□ -1.27
PABPC1-216ENST00000520868 LDHCP07864 332 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 CYP2B6P20813 491 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 COMTP21964 271 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 STAT5BP51692 787 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 ADCY1Q08828 1119 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 MVPQ14764 893 aaKnown RBP7.09□□□□□ -1.27
PABPC1-216ENST00000520868 TBR1Q16650 682 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 FAM110CQ1W6H9 321 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 GORABQ5T7V8 394 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 SH3RF3Q8TEJ3 882 aaPredicted RBP7.09□□□□□ -1.27
PABPC1-216ENST00000520868 NINJ1Q92982 152 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 NSUN4Q96CB9 384 aaKnown RBP7.09□□□□□ -1.27
PABPC1-216ENST00000520868 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 API5Q9BZZ5 524 aaKnown RBP7.09□□□□□ -1.27
PABPC1-216ENST00000520868 OSBPL5Q9H0X9 879 aaPredicted RBP7.09□□□□□ -1.27
PABPC1-216ENST00000520868 HMG20BQ9P0W2 317 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 SAE1Q9UBE0 346 aaPredicted RBP7.09□□□□□ -1.27
PABPC1-216ENST00000520868 GJD2Q9UKL4 321 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 SPO11Q9Y5K1 396 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 SLC30A1Q9Y6M5 507 aa7.09□□□□□ -1.27
PABPC1-216ENST00000520868 LAMA3Q16787 3333 aa7.09□□□□□ -1.28
PABPC1-216ENST00000520868 RFX7Q2KHR2 1363 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 PMS2P1A4D2B8 440 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 MATN2O00339 956 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 MAFGO15525 162 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 GAS7O60861 476 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 CDC45O75419 566 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 CAPN2P17655 700 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 POU3F2P20265 443 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-216ENST00000520868 GCLCP48506 637 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-216ENST00000520868 NEK4P51957 841 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 GSTO1P78417 241 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 KLHDC10Q6PID8 442 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 POLNQ7Z5Q5 900 aa7.08□□□□□ -1.28
PABPC1-216ENST00000520868 TEX11Q8IYF3 940 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms