RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 KIAA1328Q86T90 577 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 RNF169Q8NCN4 708 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 KIF18AQ8NI77 898 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 HPDLQ96IR7 371 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 TSGA10Q9BZW7 698 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 FAM124BQ9H5Z6 455 aaPredicted RBP9.13□□□□□ -0.95
VAPB-206ENST00000520497 HAUS4Q9H6D7 363 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 GOLGA2P5Q9HBQ8 144 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 TRMT1Q9NXH9 659 aaKnown RBP9.13□□□□□ -0.95
VAPB-206ENST00000520497 NENFQ9UMX5 172 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 PAXBP1Q9Y5B6 917 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 EPN1Q9Y6I3 576 aaPredicted RBP9.13□□□□□ -0.95
VAPB-206ENST00000520497 PLXNA4Q9HCM2 1894 aa9.13□□□□□ -0.95
VAPB-206ENST00000520497 EIF3CLB5ME19 914 aaKnown RBP9.12□□□□□ -0.95
VAPB-206ENST00000520497 ZNF263O14978 683 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 AKR1B10O60218 316 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 KIF5CO60282 957 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 LCA5LO95447 670 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 FGFR1P11362 822 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 CSF2RAP15509 400 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 RAG1P15918 1043 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 EIF4A3P38919 411 aaKnown RBP9.12□□□□□ -0.95
VAPB-206ENST00000520497 PNPLA4P41247 253 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 KIF11P52732 1056 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 ARID5AQ03989 594 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 DSC1Q08554 894 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 INCA1Q0VD86 236 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 MYO1EQ12965 1108 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 MFSD5Q6N075 450 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 GLB1LQ6UWU2 654 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 SCARA5Q6ZMJ2 495 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 ZNF571Q7Z3V5 609 aaPredicted RBP9.12□□□□□ -0.95
VAPB-206ENST00000520497 LIMS2Q7Z4I7 341 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 DEFB128Q7Z7B8 93 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 C17orf53Q8N3J3 647 aaPredicted RBP9.12□□□□□ -0.95
VAPB-206ENST00000520497 EPS8L1Q8TE68 723 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 RSPH1Q8WYR4 309 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 ZNF560Q96MR9 790 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 EIF3CQ99613 913 aaKnown RBP9.12□□□□□ -0.95
VAPB-206ENST00000520497 SDCBP2Q9H190 292 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 SMYD3Q9H7B4 428 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 CYP3A43Q9HB55 503 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 PRDM5Q9NQX1 630 aaPredicted RBP9.12□□□□□ -0.95
VAPB-206ENST00000520497 CISHQ9NSE2 258 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 GDAP2Q9NXN4 497 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 MYO1AQ9UBC5 1043 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 NOCTQ9UK39 431 aaKnown RBP9.12□□□□□ -0.95
VAPB-206ENST00000520497 POLIQ9UNA4 740 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
VAPB-206ENST00000520497 MYO16Q9Y6X6 1858 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 KPNA7A9QM74 516 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 PODXLO00592 558 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 SPTLC1O15269 473 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 CYP26A1O43174 497 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 KRT86O43790 486 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 B4GALT3O60512 393 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 CILPO75339 1184 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 POMCP01189 267 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 PFKMP08237 780 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 WEE2P0C1S8 567 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 P4HA1P13674 534 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 RPL9P32969 192 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 BMP8BP34820 402 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 AARSP49588 968 aaKnown RBP eCLIP9.11□□□□□ -0.95
VAPB-206ENST00000520497 TAF6P49848 677 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 LILRA4P59901 499 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 YWHAEP62258 255 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 TUSC3Q13454 348 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 IKBKEQ14164 716 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 BMS1Q14692 1282 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 SLC18A3Q16572 532 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 UPP1Q16831 310 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 SV2CQ496J9 727 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 NOMO2Q5JPE7 1267 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 C10orf76Q5T2E6 689 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 TMEM270Q6UE05 265 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 SLC47A2Q86VL8 602 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 NPAS4Q8IUM7 802 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 RBBP8NLQ8NC74 664 aaPredicted RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 ACRBPQ8NEB7 543 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 SLC30A5Q8TAD4 765 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 DDX1Q92499 740 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 UROC1Q96N76 676 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 DESI2Q9BSY9 194 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 UBE2OQ9C0C9 1292 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 ACP6Q9NPH0 428 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 NXF1Q9UBU9 619 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 INPP5FQ9Y2H2 1132 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 REXO2Q9Y3B8 237 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 R3HCC1Q9Y3T6 440 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 PCDHB7Q9Y5E2 793 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 ATG2AQ2TAZ0 1938 aa9.11□□□□□ -0.95
VAPB-206ENST00000520497 MTCL1Q9Y4B5 1905 aaKnown RBP9.11□□□□□ -0.95
VAPB-206ENST00000520497 MYO9BQ13459 2157 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 ATP8B3O60423 1300 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 A0A087X0T9 212 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 ABHD14A-ACY1A0A1B0GW23 586 aa9.1□□□□□ -0.95
VAPB-206ENST00000520497 USP27XA6NNY8 438 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms