RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 SYCP3Q8IZU3 236 aa8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 LRRC71Q8N4P6 559 aa8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 ANKRD20A12PQ8NF67 263 aa8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 GOLGA5Q8TBA6 731 aa8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 SHKBP1Q8TBC3 707 aa8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 TCP11Q8WWU5 503 aa8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 CCDC113Q9H0I3 377 aa8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 CGNQ9P2M7 1197 aaKnown RBP8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 SUCLA2Q9P2R7 463 aaPredicted RBP8.57□□□□□ -1.04
CTHRC1-203ENST00000520337 CITO14578 2027 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 RRN3P2A6NIE6 340 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 H0YCG3 227 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 SLC16A3O15427 465 aaKnown RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 ASAP2O43150 1006 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 KPNA6O60684 536 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 ADAMTS4O75173 837 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 B3GALT4O96024 378 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 PIGRP01833 764 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 HMGCRP04035 888 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 EDN1P05305 212 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 TPM3P06753 285 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 GJB1P08034 283 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 MYL3P08590 195 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 SMIM10L2AP0DMW4 78 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 SMIM10L2BP0DMW5 78 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 HSPA6P17066 643 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 SCP2P22307 547 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 CNGA1P29973 690 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 MTIF2P46199 727 aaKnown RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 CLCN3P51790 818 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 IGBP1P78318 339 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 PURAQ00577 322 aaKnown RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 PPFIA1Q13136 1202 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 MXD4Q14582 209 aaPredicted RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 MAN2A1Q16706 1144 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 KIAA0753Q2KHM9 967 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 ZNF423Q2M1K9 1284 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 SPRED3Q2MJR0 410 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 FILIP1LQ4L180 1135 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 VWA3BQ502W6 1294 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 SGO2Q562F6 1265 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 BRDTQ58F21 947 aaPredicted RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 CDCA2Q69YH5 1023 aaPredicted RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 CCSAPQ6IQ19 270 aaPredicted RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 HS2ST1Q7LGA3 356 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 CCDC186Q7Z3E2 898 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 KIAA0319LQ8IZA0 1049 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 METTL13Q8N6R0 699 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 ZSWIM2Q8NEG5 633 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 KLHDC9Q8NEP7 349 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 DEPTORQ8TB45 409 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 PPP1R13LQ8WUF5 828 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 LMBR1Q8WVP7 490 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 PSPC1Q8WXF1 523 aaKnown RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 JPH2Q9BR39 696 aaPredicted RBP8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 CBWD1Q9BRT8 395 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 NPHS2Q9NP85 383 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 SETD4Q9NVD3 440 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 IMPACTQ9P2X3 320 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 EXOC7Q9UPT5 735 aa8.56□□□□□ -1.04
CTHRC1-203ENST00000520337 MBLAC1A4D2B0 266 aaPredicted RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 LRRIQ4A6NIV6 560 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 K7ERI5 159 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 MED26O95402 600 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 PGK1P00558 417 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 C6orf222P0C671 652 aaPredicted RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 SRGAP2CP0DJJ0 459 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 RARBP10826 455 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 SPINK2P20155 84 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 HOXC8P31273 242 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 ABCD1P33897 745 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 PSMC2P35998 433 aaKnown RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 DNM2P50570 870 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 CYP2J2P51589 502 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 PRMT2P55345 433 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 MAP2K1Q02750 393 aaPredicted RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 UBXN1Q04323 297 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 POU5F1BQ06416 359 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 SOX4Q06945 474 aaPredicted RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 ORC1Q13415 861 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 CCDC40Q4G0X9 1142 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 SPECC1LQ69YQ0 1117 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 ARMCX5Q6P1M9 558 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 RHPN2Q8IUC4 686 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 RNF149Q8NC42 400 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 RAET1EQ8TD07 263 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 CACTINQ8WUQ7 758 aaKnown RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 ALKBH8Q96BT7 664 aaKnown RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 ZNF830Q96NB3 372 aaPredicted RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 ERGIC2Q96RQ1 377 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 MTG1Q9BT17 334 aaPredicted RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 NFKBIZQ9BYH8 718 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 RBCK1Q9BYM8 510 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 HAPLN2Q9GZV7 340 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 NDST4Q9H3R1 872 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 PCIF1Q9H4Z3 704 aa8.55□□□□□ -1.04
CTHRC1-203ENST00000520337 ZNF576Q9H609 170 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms