RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 KCNN1Q92952 543 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 CHAMP1Q96JM3 812 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 PGLYRP2Q96PD5 576 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 CCDC94Q9BW85 323 aaPredicted RBP9.43□□□□□ -0.9
PABPC1-213ENST00000519848 STRA6Q9BX79 667 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 MFSD1Q9H3U5 465 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
PABPC1-213ENST00000519848 C2orf42Q9NWW7 574 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 WNT16Q9UBV4 365 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 FBXL21Q9UKT6 434 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 YIPF1Q9Y548 306 aa9.43□□□□□ -0.9
PABPC1-213ENST00000519848 KIAA1549LQ6ZVL6 1849 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 PTPRJQ12913 1337 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 A0A0B4J269 797 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 K7ENM7 598 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 M0QZQ0 153 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 ARNTLO00327 626 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 NR1I2O75469 434 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 MCM4P33991 863 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 FAM78AQ5JUQ0 283 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 ARL6IP4Q66PJ3 421 aaKnown RBP9.42□□□□□ -0.9
PABPC1-213ENST00000519848 VITQ6UXI7 678 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 ZPBP2Q6X784 338 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 BEST2Q8NFU1 509 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 CXorf38Q8TB03 319 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 SHKBP1Q8TBC3 707 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 HPS3Q969F9 1004 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 DNAJC19Q96DA6 116 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 CHFRQ96EP1 664 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 ACAP3Q96P50 834 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 USP28Q96RU2 1077 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 CORO1BQ9BR76 489 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.42□□□□□ -0.9
PABPC1-213ENST00000519848 CPSF3Q9UKF6 684 aaKnown RBP9.42□□□□□ -0.9
PABPC1-213ENST00000519848 TBX20Q9UMR3 447 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 MYO16Q9Y6X6 1858 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 FRYLO94915 3013 aa9.42□□□□□ -0.9
PABPC1-213ENST00000519848 ZFHX2Q9C0A1 2572 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-213ENST00000519848 GPR179Q6PRD1 2367 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 MYMKA6NI61 221 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ACTN4O43707 911 aaKnown RBP9.41□□□□□ -0.9
PABPC1-213ENST00000519848 PRAMEF12O95522 483 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 SNRPBP14678 240 aaKnown RBP9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ATF2P15336 505 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ATF6P18850 670 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 VIPR2P41587 438 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 GPR15P49685 360 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ACOT2P49753 483 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 EPHA5P54756 1037 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 STARD6P59095 220 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 CREMQ03060 361 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 TWF1Q12792 350 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ELAVL2Q12926 359 aaKnown RBP9.41□□□□□ -0.9
PABPC1-213ENST00000519848 GAS6Q14393 721 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 CTXN3Q4LDR2 81 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 TSSK4Q6SA08 328 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ANKS3Q6ZW76 656 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 MAP4K3Q8IVH8 894 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 TCEAL8Q8IYN2 117 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 DCLK2Q8N568 766 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ATAD1Q8NBU5 361 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ZNF461Q8TAF7 563 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 BORCS6Q96GS4 357 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 UROC1Q96N76 676 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 HEBP1Q9NRV9 189 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 TMLHEQ9NVH6 421 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 SMC3Q9UQE7 1217 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 NME7Q9Y5B8 376 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 PTPRDP23468 1912 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 GREB1Q4ZG55 1949 aa9.41□□□□□ -0.9
PABPC1-213ENST00000519848 ANO9A1A5B4 782 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 MTMR11A4FU01 709 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 VPS37CA5D8V6 355 aaPredicted RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 ANTXRLA6NF34 631 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 SYN3O14994 580 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 SP9P0CG40 484 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 TDGF1P13385 188 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 HOXD13P35453 343 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 SOX9P48436 509 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 YARSP54577 528 aaKnown RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 CEBPZQ03701 1054 aaKnown RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 TEAD2Q15562 447 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 MLF2Q15773 248 aaPredicted RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 SPATA1Q5VX52 437 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 LARP1BQ659C4 914 aaKnown RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 PHLDB3Q6NSJ2 640 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 GAREM2Q75VX8 874 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 DYMQ7RTS9 669 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 TMEM150AQ86TG1 271 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 LRRTM3Q86VH5 581 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 LARP4BQ92615 738 aaKnown RBP9.4□□□□□ -0.9
PABPC1-213ENST00000519848 STAMQ92783 540 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 ASB16Q96NS5 453 aa9.4□□□□□ -0.9
PABPC1-213ENST00000519848 LPIN3Q9BQK8 851 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms