RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 JAM2P57087 298 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 PTK2Q05397 1052 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 TMEM270Q6UE05 265 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 TMCO2Q7Z6W1 182 aaPredicted RBP18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 VPS36Q86VN1 386 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 TMEM86AQ8N2M4 240 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 TMEM130Q8N3G9 435 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 TC2NQ8N9U0 490 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 RABGGTAQ92696 567 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 KAT5Q92993 513 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 DNAJC7Q99615 494 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 CISHQ9NSE2 258 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 AIPL1Q9NZN9 384 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 PCDH10Q9P2E7 1040 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 CACNG4Q9UBN1 327 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 DNAJB4Q9UDY4 337 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 PCDHB12Q9Y5F1 795 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 FOXN3O00409 490 aaPredicted RBP18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 KIF4AO95239 1232 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 SERPING1P05155 500 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 GALTP07902 379 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 SLC11A1P49279 550 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 GOLGA8FQ08AF8 430 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 GOLGA8DPQ0D2H9 430 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 KLHL30Q0D2K2 578 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 TDRD12Q587J7 1177 aaKnown RBP18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 SCARA3Q6AZY7 606 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 CYP26C1Q6V0L0 522 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 TMTC1Q8IUR5 882 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 LRRC8AQ8IWT6 810 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 THEM5Q8N1Q8 247 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 OR6B3Q8NGW1 331 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 SPATA18Q8TC71 538 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 HASPINQ8TF76 798 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 ARID3AQ99856 593 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 BAG1Q99933 345 aaPredicted RBP18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 PAAF1Q9BRP4 392 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 DEF6Q9H4E7 631 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 SMYD3Q9H7B4 428 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 ADAM28Q9UKQ2 775 aa18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 BARX2Q9UMQ3 279 aaPredicted RBP18.77■□□□□ 0.6
IGHV3-52-201ENST00000519770 SF3B1O75533 1304 aaKnown RBP eCLIP18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 SPTLC1O15269 473 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 TACC1O75410 805 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 PPM1AP35813 382 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 GNL1P36915 607 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 RAP1GAPP47736 663 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 LHX1P48742 406 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 PDE6CP51160 858 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 CDH8P55286 799 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 HTRA4P83105 476 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 TIGD5Q53EQ6 642 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 KCNT2Q6UVM3 1135 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 UNC93AQ86WB7 457 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 FAM71AQ8IYT1 594 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 ADGRF2Q8IZF7 708 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 RBBP8NLQ8NC74 664 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 TMEM169Q96HH4 297 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 SUSD3Q96L08 255 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 NT5C1AQ9BXI3 368 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 PDCL3Q9H2J4 239 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 AJAP1Q9UKB5 411 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 PCDHB8Q9UN66 801 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 RWDD3Q9Y3V2 267 aa18.76■□□□□ 0.59
IGHV3-52-201ENST00000519770 FNDC1Q4ZHG4 1894 aaPredicted RBP18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 A8MXQ7 604 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 RNF225M0QZC1 329 aaPredicted RBP18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 CYP26A1O43174 497 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 IPO7O95373 1038 aaKnown RBP18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 HNRNPH3P31942 346 aaKnown RBP18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 BRCC3P46736 316 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 AARSP49588 968 aaKnown RBP eCLIP18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 ARID5BQ14865 1188 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 SHHQ15465 462 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 SOWAHAQ2M3V2 549 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 C3orf58Q8NDZ4 430 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 TNIP3Q96KP6 325 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 CWH43Q9H720 699 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 SPG21Q9NZD8 308 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 STK39Q9UEW8 545 aa18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 MRPL42Q9Y6G3 142 aaKnown RBP18.75■□□□□ 0.59
IGHV3-52-201ENST00000519770 H0YGN5 161 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 M0QZQ0 153 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 SYN3O14994 580 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 MED7O43513 233 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 PAEPP09466 180 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 TYMPP19971 482 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 WARSP23381 471 aaKnown RBP18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 PCSK1P29120 753 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 NDST1P52848 882 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 CDK17Q00537 523 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 KRT17Q04695 432 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 INCA1Q0VD86 236 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 ZNF394Q53GI3 561 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 CCDC42Q96M95 316 aa18.74■□□□□ 0.59
IGHV3-52-201ENST00000519770 RC3H2Q9HBD1 1191 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms