RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 SLC34A2O95436 690 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 PDGFRBP09619 1106 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 CLCN4P51793 760 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 TNNC1P63316 161 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 ROR1Q01973 937 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 MYO1EQ12965 1108 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 COBLL1Q53SF7 1204 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 ZNF280DQ6N043 979 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 SV2AQ7L0J3 742 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 OSTM1Q86WC4 334 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 NT5DC4Q86YG4 428 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 PDCL2Q8N4E4 241 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 MLKLQ8NB16 471 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 TAS1R2Q8TE23 839 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 SLC22A17Q8WUG5 538 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 NECAB3Q96P71 396 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 MED15Q96RN5 788 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 GTPBP4Q9BZE4 634 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 DNAJC25Q9H1X3 360 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 CLEC1BQ9P126 229 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 MTRRQ9UBK8 725 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 ARMCX3Q9UH62 379 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 SSX2IPQ9Y2D8 614 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 MYO16Q9Y6X6 1858 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 SYCE3A1L190 88 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 H7C4K7 107 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 M0QZQ0 153 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 PRRG1O14668 218 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 SYN3O14994 580 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 CCL16O15467 120 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 C4BPAP04003 597 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 IL9P15248 144 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 PPP1R2P41236 205 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 PNPLA4P41247 253 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 MTIF2P46199 727 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 MXI1P50539 228 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 CDH8P55286 799 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 MYBPC2Q14324 1141 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 NFIL3Q16649 462 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 WDR72Q3MJ13 1102 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 SLC39A12Q504Y0 691 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 PTCRAQ6ISU1 281 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 ANKRD54Q6NXT1 300 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 ADGRF2Q8IZF7 708 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 TTC9BQ8N6N2 239 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 KREMEN2Q8NCW0 462 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 STKLD1Q8NE28 680 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 OR10T2Q8NGX3 314 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 SLC7A14Q8TBB6 771 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 CASP10Q92851 521 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 SEMA4DQ92854 862 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 TSPAN18Q96SJ8 248 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 RXFP1Q9HBX9 757 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 DDX43Q9NXZ2 648 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 RWDD2AQ9UIY3 292 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 CD207Q9UJ71 328 aa13.16□□□□□ -0.3
CTNNA1-211ENST00000518910 XIRP2A4UGR9 3374 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 DENND4AQ7Z401 1863 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 WDR27A2RRH5 827 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 GRXCR2A6NFK2 248 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 SLC16A3O15427 465 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 ATP2C2O75185 946 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 CD58P19256 250 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 MYL7Q01449 175 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 POU5F1Q01860 360 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 TYRO3Q06418 890 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 STX1AQ16623 288 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 CBWD6Q4V339 395 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 ZNF667Q5HYK9 610 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 DPH6Q7L8W6 267 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 LRRC52Q8N7C0 313 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 CDCA3Q99618 268 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 RHOBTB2Q9BYZ6 727 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
CTNNA1-211ENST00000518910 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms