RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 PNPLA4P41247 253 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 BFSP1Q12934 665 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 TPGS2Q68CL5 300 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 OTOP3Q7RTS5 596 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 GRASPQ7Z6J2 395 aaPredicted RBP20.13■□□□□ 0.81
FAM49B-208ENST00000518344 WDR49Q8IV35 697 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 BORCS6Q96GS4 357 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 C1QTNF1Q9BXJ1 281 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 KCTD10Q9H3F6 313 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 LIMD1Q9UGP4 676 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 DSEQ9UL01 958 aa20.13■□□□□ 0.81
FAM49B-208ENST00000518344 OR6C75A6NL08 312 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 PDXKO00764 312 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 GADD45BO75293 160 aaPredicted RBP20.12■□□□□ 0.81
FAM49B-208ENST00000518344 PAPLNO95428 1278 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 SEC24AO95486 1093 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 HOXA9P31269 272 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 GBP2P32456 591 aaPredicted RBP20.12■□□□□ 0.81
FAM49B-208ENST00000518344 ADCY1Q08828 1119 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 PSMD6Q15008 389 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 WSCD1Q658N2 575 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 RNF19BQ6ZMZ0 732 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 RTL10Q7L3V2 364 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 TCEAL8Q8IYN2 117 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 PLCD3Q8N3E9 789 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 PGLYRP2Q96PD5 576 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 SIX4Q9UIU6 781 aa20.12■□□□□ 0.81
FAM49B-208ENST00000518344 HOOK1Q9UJC3 728 aaKnown RBP20.12■□□□□ 0.81
FAM49B-208ENST00000518344 CALUO43852 315 aaPredicted RBP20.11■□□□□ 0.81
FAM49B-208ENST00000518344 PRPF40AO75400 957 aaKnown RBP20.11■□□□□ 0.81
FAM49B-208ENST00000518344 LRG1P02750 347 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 NR3C1P04150 777 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 CYP11A1P05108 521 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 NTHL1P78549 312 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 GET4Q7L5D6 327 aaPredicted RBP20.11■□□□□ 0.81
FAM49B-208ENST00000518344 ZDHHC14Q8IZN3 488 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 THEM5Q8N1Q8 247 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 LRRC52Q8N7C0 313 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 CXorf38Q8TB03 319 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 ERCC4Q92889 916 aaPredicted RBP20.11■□□□□ 0.81
FAM49B-208ENST00000518344 MFSD14AQ96MC6 490 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 TIGD1Q96MW7 591 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 TMEM209Q96SK2 561 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 CGRRF1Q99675 332 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 DMAC2Q9NW81 257 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 RMND1Q9NWS8 449 aa20.11■□□□□ 0.81
FAM49B-208ENST00000518344 AFF4Q9UHB7 1163 aaKnown RBP20.11■□□□□ 0.81
FAM49B-208ENST00000518344 FAM86C2PA6NEL3 165 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 KINO60870 393 aaKnown RBP20.1■□□□□ 0.81
FAM49B-208ENST00000518344 HUS1O60921 280 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 SMC2O95347 1197 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 FSHRP23945 695 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 MYO1EQ12965 1108 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 MYBPC2Q14324 1141 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 CEP135Q66GS9 1140 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 TRAPPC11Q7Z392 1133 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 GUF1Q8N442 669 aaKnown RBP20.1■□□□□ 0.81
FAM49B-208ENST00000518344 HCFC1R1Q9NWW0 138 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 SNX9Q9Y5X1 595 aa20.1■□□□□ 0.81
FAM49B-208ENST00000518344 ANK1P16157 1881 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 ASGR2P07307 311 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 CASP4P49662 377 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 CDR1P51861 262 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 GPR17Q13304 367 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 SLC9A9Q8IVB4 645 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 SMYD4Q8IYR2 804 aaPredicted RBP20.09■□□□□ 0.81
FAM49B-208ENST00000518344 OR10T2Q8NGX3 314 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 SMARCE1Q969G3 411 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 HPDLQ96IR7 371 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 MYADMQ96S97 322 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 DNMT3BQ9UBC3 853 aaKnown RBP20.09■□□□□ 0.81
FAM49B-208ENST00000518344 MAFFQ9ULX9 164 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 TRAF3IP3Q9Y228 551 aa20.09■□□□□ 0.81
FAM49B-208ENST00000518344 N4BP1O75113 896 aaKnown RBP20.08■□□□□ 0.81
FAM49B-208ENST00000518344 POU2F2P09086 479 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 TWF1Q12792 350 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 DUSP4Q13115 394 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 PTPN21Q16825 1174 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 SLC39A12Q504Y0 691 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 PDCL2Q8N4E4 241 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 ZNF516Q92618 1163 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 GSDMAQ96QA5 445 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 RTP3Q9BQQ7 232 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 GZF1Q9H116 711 aaPredicted RBP20.08■□□□□ 0.81
FAM49B-208ENST00000518344 L1RE1Q9UN81 338 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 FRMD4BQ9Y2L6 1034 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 SLC27A5Q9Y2P5 690 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 PCDHA5Q9Y5H7 936 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 INSL5Q9Y5Q6 135 aa20.08■□□□□ 0.81
FAM49B-208ENST00000518344 BDP1A6H8Y1 2624 aa20.08■□□□□ 0.8
FAM49B-208ENST00000518344 PHACTR2O75167 634 aa20.07■□□□□ 0.8
FAM49B-208ENST00000518344 VNN2O95498 520 aa20.07■□□□□ 0.8
FAM49B-208ENST00000518344 CST3P01034 146 aaPredicted RBP20.07■□□□□ 0.8
FAM49B-208ENST00000518344 PTPN2P17706 415 aa20.07■□□□□ 0.8
FAM49B-208ENST00000518344 NR2F2P24468 414 aa20.07■□□□□ 0.8
FAM49B-208ENST00000518344 ZXDAP98168 799 aa20.07■□□□□ 0.8
FAM49B-208ENST00000518344 TRPC3Q13507 836 aa20.07■□□□□ 0.8
FAM49B-208ENST00000518344 PABPC1LQ4VXU2 614 aaKnown RBP20.07■□□□□ 0.8
FAM49B-208ENST00000518344 TMEM31Q5JXX7 168 aa20.07■□□□□ 0.8
FAM49B-208ENST00000518344 ELMOD1Q8N336 334 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms