RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 LRRC8CQ8TDW0 803 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 STK32AQ8WU08 396 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 GATAD2BQ8WXI9 593 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZNF845Q96IR2 970 aaPredicted RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 PKP4Q99569 1192 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 REXO4Q9GZR2 422 aaKnown RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ENKD1Q9H0I2 346 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 PLEKHA4Q9H4M7 779 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 PDZD7Q9H5P4 517 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 WHRNQ9P202 907 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 DSEQ9UL01 958 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 ZSCAN21Q9Y5A6 473 aaPredicted RBP-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 PCDHB14Q9Y5E9 798 aa-0.53□□□□□ -2.49
SNORA40.16-201ENST00000517238 GAKO14976 1311 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 CTIFO43310 598 aaKnown RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 NDUFB5O43674 189 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 PRKNO60260 465 aaPredicted RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 MPIG6BO95866 241 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 KRT6AP02538 564 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 KRT6BP04259 564 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 CYP2A6P11509 494 aaPredicted RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 NDUFB7P17568 137 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 APEX1P27695 318 aaKnown RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 KRT6CP48668 564 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 PHEXP78562 749 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 CDCA8Q53HL2 280 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ARHGAP11AQ6P4F7 1023 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZCCHC12Q6PEW1 402 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZNF813Q6ZN06 617 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 CREB3L2Q70SY1 520 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 H1FNTQ75WM6 255 aaPredicted RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ADAT2Q7Z6V5 191 aaKnown RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 SMIM29Q86T20 159 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 COL23A1Q86Y22 540 aaPredicted RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 TICAM1Q8IUC6 712 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZNF440Q8IYI8 595 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 RCBTB1Q8NDN9 531 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 FGFBP3Q8TAT2 258 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 DEPTORQ8TB45 409 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 MYCBPAPQ8TBZ2 947 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 LPIN2Q92539 896 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 IGSF21Q96ID5 467 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 EXOC2Q96KP1 924 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 WDR92Q96MX6 357 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZNF285Q96NJ3 590 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 DUX5Q96PT3 197 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZNF300Q96RE9 604 aaPredicted RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 SLC9A7Q96T83 725 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 EFHD1Q9BUP0 239 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 PPP1R12CQ9BZL4 782 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 INTS7Q9NVH2 962 aaKnown RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 TFCP2L1Q9NZI6 479 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 PLEKHB1Q9UF11 243 aaPredicted RBP-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZMIZ1Q9ULJ6 1067 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 COG6Q9Y2V7 657 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 SORL1Q92673 2214 aa-0.54□□□□□ -2.5
SNORA40.16-201ENST00000517238 PRAMEF25A6NGN4 478 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 RSPH10B2B2RC85 870 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 VWC2LB2RUY7 222 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 NKRFO15226 690 aaKnown RBP eCLIP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 MEFVO15553 781 aaPredicted RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 CBFA2T2O43439 604 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 SORBS2O94875 1100 aaKnown RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 FAM163BP0C2L3 166 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 USP17L7P0C7H9 530 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 RSPH10BP0C881 870 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 GNAT1P11488 350 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 MTHFD1P11586 935 aaKnown RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZNF16P17020 682 aaPredicted RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 PTPN1P18031 435 aaKnown RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 CDKN1AP38936 164 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 PSG6Q00889 435 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 SPIRE1Q08AE8 756 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 ARL16Q0P5N6 197 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 SF3B2Q13435 895 aaKnown RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 KCNJ12Q14500 433 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 PLAC9Q5JTB6 97 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 NSUN5P2Q63ZY6 315 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 PLA2G4FQ68DD2 849 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 KRT39Q6A163 491 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZSCAN25Q6NSZ9 544 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 EPHX4Q8IUS5 362 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 LMNTD2Q8IXW0 634 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 ADAD2Q8NCV1 583 aaKnown RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 SLC30A5Q8TAD4 765 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 NPLOC4Q8TAT6 608 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 ADAMTS14Q8WXS8 1223 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 HERVK_113Q902F9 699 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 PBKQ96KB5 322 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 FOXN4Q96NZ1 517 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 ZFYVE21Q9BQ24 234 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 OSBPL7Q9BZF2 842 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 CD244Q9BZW8 370 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 GBP3Q9H0R5 595 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 BCL11AQ9H165 835 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 PRDM12Q9H4Q4 367 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 DDX31Q9H8H2 851 aaKnown RBP-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 KANSL2Q9H9L4 492 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 TCF7L1Q9HCS4 588 aa-0.55□□□□□ -2.5
SNORA40.16-201ENST00000517238 OGFRQ9NZT2 677 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms