RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 PPARGC1AQ9UBK2 798 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CGGBP1Q9UFW8 167 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DTX4Q9Y2E6 619 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NOC2LQ9Y3T9 749 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZSCAN21Q9Y5A6 473 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 COL7A1Q02388 2944 aa-0.39□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ARID1AO14497 2285 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SYNE1Q8NF91 8797 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MEIS3P2A8K0S8 358 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM72CH0Y354 149 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 WNT10BO00744 389 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GPR182O15218 404 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MEFVO15553 781 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CTIFO43310 598 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF354AO60765 605 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ATE1O95260 518 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GPANK1O95872 356 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ALDH2P05091 517 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CHRM5P08912 532 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HOXC6P09630 235 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CYP2A6P11509 494 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FGFR4P22455 802 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 APEX1P27695 318 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ECHS1P30084 290 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 POLD2P49005 469 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CLCN5P51795 746 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CHN2P52757 468 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HERVK_113P62684 666 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PPATQ06203 517 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PPIGQ13427 754 aaKnown RBP eCLIP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MPP2Q14168 576 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CCDC85BQ15834 202 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GEN1Q17RS7 908 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CERKLQ49MI3 558 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AARS2Q5JTZ9 985 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM72AQ5TYM5 149 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TBC1D9BQ66K14 1250 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GTF2IRD2BQ6EKJ0 949 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM72DQ6L9T8 149 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAAP20Q6NZ36 180 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 METTL7BQ6UX53 244 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM83HQ6ZRV2 1179 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RFX8Q6ZV50 586 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CREB3L2Q70SY1 520 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MARK2Q7KZI7 788 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF771Q7L3S4 317 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FBXO33Q7Z6M2 555 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GTF2IRD2Q86UP8 949 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM72BQ86X60 149 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LYPD1Q8N2G4 141 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ARHGEF39Q8N4T4 335 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FANCBQ8NB91 859 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RNF169Q8NCN4 708 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ADAD2Q8NCV1 583 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RCBTB1Q8NDN9 531 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ADCY4Q8NFM4 1077 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MYCBPAPQ8TBZ2 947 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZPLD1Q8TCW7 415 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PHF10Q8WUB8 498 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ADAMTS14Q8WXS8 1223 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HERVK_113Q902F9 699 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RPGRQ92834 1020 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CHAMP1Q96JM3 812 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EXOC2Q96KP1 924 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF285Q96NJ3 590 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 BCL11AQ9H165 835 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SERTAD4Q9NUC0 356 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PLK2Q9NYY3 685 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PLEKHB1Q9UF11 243 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DSEQ9UL01 958 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 BRPF3Q9ULD4 1205 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZMIZ1Q9ULJ6 1067 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MYO6Q9UM54 1294 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PCDHA2Q9Y5H9 948 aa-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DMBT1Q9UGM3 2413 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.41□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ERVV-1B6SEH8 477 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 POC1B-GALNT4F8VUJ3 575 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 H7C1Q1 480 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GIPC1O14908 333 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DAPK3O43293 454 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KCNQ3O43525 872 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NDUFB5O43674 189 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NRP2O60462 931 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 WDR47O94967 919 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 EPN2O95208 641 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZBTB11O95625 1053 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 F13A1P00488 732 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ITGAVP06756 1048 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 HOXC4P09017 264 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 WEE2P0C1S8 567 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 USP17L7P0C7H9 530 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 MTHFD1P11586 935 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RLBP1P12271 317 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GSPT1P15170 499 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PTPN1P18031 435 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ATP2B4P23634 1241 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ALDH7A1P49419 539 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NXPH1P58417 271 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SEC61A1P61619 476 aaKnown RBP-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms