RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 MTM1Q13496 603 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 UBE3CQ15386 1083 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 DGKDQ16760 1214 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 ZNF827Q17R98 1081 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 C19orf54Q5BKX5 351 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 TMTC4Q5T4D3 741 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 MAP3K21Q5TCX8 1036 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 KANK2Q63ZY3 851 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 TEPPQ6URK8 271 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 KIAA0408Q6ZU52 694 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 B4GALNT4Q76KP1 1039 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 KRT28Q7Z3Y7 464 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 NBPF11Q86T75 865 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 CHD1LQ86WJ1 897 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 PROSER1Q86XN7 944 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 KRTAP1-3Q8IUG1 177 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 SLC44A2Q8IWA5 706 aaPredicted RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 TRMT2AQ8IZ69 625 aaKnown RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 PLD6Q8N2A8 252 aaKnown RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 ANKS4BQ8N8V4 417 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 OR7D4Q8NG98 312 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 SCAMP5Q8TAC9 235 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 WDR48Q8TAF3 677 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 NETO1Q8TDF5 533 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 CSGALNACT1Q8TDX6 532 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 IGDCC4Q8TDY8 1250 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 IPCEF1Q8WWN9 437 aaPredicted RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 CFHR4Q92496 578 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 SDCCAG3Q96C92 435 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 NEIL1Q96FI4 390 aaPredicted RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 DYDC2Q96IM9 177 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 GPR63Q9BZJ6 419 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 ADAMTS10Q9H324 1103 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 ELAC1Q9H777 363 aaKnown RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 C7orf69Q9H7B7 122 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 BCO1Q9HAY6 547 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 SLAMF7Q9NQ25 335 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 A1CFQ9NQ94 594 aaKnown RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 LANCL2Q9NS86 450 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 KRT84Q9NSB2 600 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 HAUS2Q9NVX0 235 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 SIDT1Q9NXL6 827 aaKnown RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 RBPJLQ9UBG7 517 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 LPAR3Q9UBY5 353 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 TBC1D29Q9UFV1 150 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 RGS17Q9UGC6 210 aaPredicted RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 TRPS1Q9UHF7 1281 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 DNAI1Q9UI46 699 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 MAGEL2Q9UJ55 1249 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 MID2Q9UJV3 735 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 NUDT5Q9UKK9 219 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 ZDHHC8Q9ULC8 765 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 ZMYND8Q9ULU4 1186 aaPredicted RBP2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 CNPY2Q9Y2B0 182 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 FRMD4BQ9Y2L6 1034 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 RAXQ9Y2V3 346 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 PAXBP1Q9Y5B6 917 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 HS3ST4Q9Y661 456 aa2.9□□□□□ -1.95
SCARNA3-201ENST00000517097 TDRD9Q8NDG6 1382 aaKnown RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PABPN1LA6NDY0 278 aaKnown RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PRSS29PA6NIE9 313 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 NOTOA8MTQ0 251 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 MASP2O00187 686 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 N4BP3O15049 544 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 SRGAP3O43295 1099 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 DKC1O60832 514 aaKnown RBP eCLIP2.89□□□□□ -1.95not detected■■□□□ 14
SCARNA3-201ENST00000517097 COBLO75128 1261 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 RASSF9O75901 435 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 USP1O94782 785 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 TMEM63AO94886 807 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 FSBPO95073 299 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ZBTB7AO95365 584 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 STARD3NLO95772 234 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ANXA1P04083 346 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 TK1P04183 234 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 CD1AP06126 327 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 DBHP09172 617 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 EGR1P18146 543 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 BTF3P20290 206 aaKnown RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 FPR1P21462 350 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 CHMP24386 653 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PCSK1P29120 753 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 OAS2P29728 719 aaKnown RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 HOXD13P35453 343 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ACTN2P35609 894 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 UBA7P41226 1012 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PHKA1P46020 1223 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ARF3P61204 181 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 KRT83P78385 493 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 IL13RA1P78552 427 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ARF1P84077 181 aaKnown RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 ZNF200P98182 395 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 CYP4F8P98187 520 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 CD83Q01151 205 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 SCAPQ12770 1279 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 CUL4AQ13619 759 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 HABP2Q14520 560 aaPredicted RBP2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 PLCB4Q15147 1175 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 STILQ15468 1287 aa2.89□□□□□ -1.95
SCARNA3-201ENST00000517097 MAPKAPK3Q16644 382 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms