RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 GREM2Q9H772 168 aa2.5□□□□□ -2.01
RNU6-1278P-201ENST00000516130 BCO1Q9HAY6 547 aa2.5□□□□□ -2.01
RNU6-1278P-201ENST00000516130 RBM12Q9NTZ6 932 aaKnown RBP2.5□□□□□ -2.01
RNU6-1278P-201ENST00000516130 TUBA8Q9NY65 449 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SERPINB13Q9UIV8 391 aa2.5□□□□□ -2.01
RNU6-1278P-201ENST00000516130 TCF20Q9UGU0 1960 aaKnown RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ALG1L2C9J202 215 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 AKR1B10O60218 316 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PHF2O75151 1096 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 GPANK1O95872 356 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 AMY1AP04745 511 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ALOX15P16050 662 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 FPR1P21462 350 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 GCSHP23434 173 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 EDNRBP24530 442 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PCSK1P29120 753 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ADSLP30566 484 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 WASP42768 502 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SLC5A3P53794 718 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ODF1Q14990 250 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PCBP2Q15366 365 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 BRDTQ58F21 947 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MUM1L1Q5H9M0 696 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SUMO4Q6EEV6 95 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 VWA1Q6PCB0 445 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ZNF66Q6ZN08 573 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PDZD4Q76G19 769 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ZGPATQ8N5A5 531 aaKnown RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 FBXO18Q8NFZ0 1043 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SLC35B2Q8TB61 432 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MDM1Q8TC05 714 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 FATE1Q969F0 183 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MTMR8Q96EF0 704 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 FAXDC2Q96IV6 333 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PAWRQ96IZ0 340 aaKnown RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SLC13A1Q9BZW2 595 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SPRTNQ9H040 489 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MDFICQ9P1T7 246 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SLC23A1Q9UHI7 598 aa2.49□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PNPLA7Q6ZV29 1317 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 CCDC78A2IDD5 438 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ANKRD62A6NC57 917 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 CXorf49A8MYA2 514 aaPredicted RBP2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 GCOM1H8Y6P7 765 aaPredicted RBP2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SNRPA1P09661 255 aaKnown RBP2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SRGNP10124 158 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MYBL2P10244 700 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ECHS1P30084 290 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ALDH1A3P47895 512 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 THBS3P49746 956 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ATP8B2P98198 1209 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ITKQ08881 620 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MTM1Q13496 603 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 FHL3Q13643 280 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 FAM47AQ5JRC9 791 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SLC18B1Q6NT16 456 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MED25Q71SY5 747 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 DCBLD1Q8N8Z6 715 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 NRG4Q8WWG1 115 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PHACTR3Q96KR7 559 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 TEKT5Q96M29 485 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 VPS16Q9H269 839 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 LDAHQ9H6V9 325 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 FAM30AQ9NZY2 134 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 NOP58Q9Y2X3 529 aaKnown RBP2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 IPPQ9Y573 584 aa2.48□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SHTN1A0MZ66 631 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PRSS44E7EML9 344 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PPP6CO00743 305 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 NDUFS2O75306 463 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SFPQP23246 707 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 MMP13P45452 471 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PLCD1P51178 756 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 HSD11B2P80365 405 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 TARDBPQ13148 414 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SP140Q13342 867 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 NOMO1Q15155 1222 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SF3B3Q15393 1217 aaKnown RBP2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SUPT20HL1Q3ZLR7 823 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 DGKKQ5KSL6 1271 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 GJC2Q5T442 439 aaPredicted RBP2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 AFMIDQ63HM1 303 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PGM2L1Q6PCE3 622 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 GSG1LQ6UXU4 331 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 AMOTL1Q8IY63 956 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 DRC7Q8IY82 874 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 PQLC1Q8N2U9 271 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ZCRB1Q8TBF4 217 aaKnown RBP2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 NSMCE1Q8WV22 266 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 DPF2Q92785 391 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 DMRTA2Q96SC8 542 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 SMAD5Q99717 465 aaKnown RBP2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 LANCL2Q9NS86 450 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 HOMER2Q9NSB8 354 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 AJAP1Q9UKB5 411 aaPredicted RBP2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 LIMCH1Q9UPQ0 1083 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 ACTL7AQ9Y615 435 aa2.47□□□□□ -2.01
RNU6-1278P-201ENST00000516130 EME2A4GXA9 379 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1278P-201ENST00000516130 FAM90A10PA6NDY2 464 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms