RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 CDY1Q9Y6F8 540 aa1.32□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZFP37Q9Y6Q3 630 aaPredicted RBP1.32□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PRRC2AP48634 2157 aaKnown RBP1.32□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ATXN2Q99700 1313 aaKnown RBP1.32□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 FLNAP21333 2647 aaKnown RBP1.32□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CSPG4Q6UVK1 2322 aa1.32□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PIKFYVEQ9Y2I7 2098 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SNRNP200O75643 2136 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PCSK5Q92824 1860 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZNF106Q9H2Y7 1883 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ANKRD36A6QL64 1941 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 A0A0A0MRY4 1105 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CCDC163A0A0D9SF12 145 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SMIM28A0A1B0GU29 152 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 A0A1W2PQF6 199 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 A0A1W2PRU2 124 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ESYT2A0FGR8 921 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TMEM8BA6NDV4 472 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DDX11L8A8MPP1 907 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KCNJ18B7U540 433 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 WASH3PC4AMC7 463 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TMEM189-UBE2V1I3L0A0 370 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 M0QZ92 97 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MAN2B1O00754 1011 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KCNK3O14649 394 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SCAMP3O14828 347 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 WNT9AO14904 365 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZNF263O14978 683 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TBX3O15119 743 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ATXN7O15265 892 aaPredicted RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ARHGAP6O43182 974 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CHMP2AO43633 222 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PRC1O43663 620 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GREM1O60565 184 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MED24O75448 989 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TADA2AO75478 443 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 AKAP3O75969 853 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DDAH1O94760 285 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MICAL2O94851 1124 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LARGE1O95461 756 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CTDNEP1O95476 244 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 RPLP2P05387 115 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PRKCBP05771 671 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PSAPP07602 524 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 FTH1P19P0C7X4 201 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SRGAP2BP0DMP2 458 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MYL4P12829 197 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ITGA4P13612 1032 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 FDPSP14324 419 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ATF2P15336 505 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ITGB6P18564 788 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 WT1P19544 449 aaPredicted RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PROZP22891 400 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MAOBP27338 520 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 WEE1P30291 646 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NMT1P30419 496 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GJA4P35212 333 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 P2RY2P41231 377 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LIFRP42702 1097 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 KIR2DL1P43626 348 aaPredicted RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MAPK8P45983 427 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 AARSP49588 968 aaKnown RBP eCLIP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NRLP54845 237 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SIM1P81133 766 aaPredicted RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NFKB2Q00653 900 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 HNRNPUQ00839 825 aaKnown RBP eCLIP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PFKPQ01813 784 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NUCB1Q02818 461 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CREB5Q02930 508 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 RNASELQ05823 741 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SPAG1Q07617 926 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ST3GAL1Q11201 340 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TWF1Q12792 350 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 GRIK3Q13003 919 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DUSP4Q13115 394 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 MAPK7Q13164 816 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SRSF6Q13247 344 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 TUSC3Q13454 348 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 HDAC1Q13547 482 aaPredicted RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LY6DQ14210 128 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CTTNQ14247 550 aaKnown RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DMC1Q14565 340 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NBR1Q14596 966 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 NONOQ15233 471 aaKnown RBP eCLIP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 ZNF77Q15935 545 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 IL17AQ16552 155 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PFKFB3Q16875 520 aaPredicted RBP1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 FAM187BQ17R55 369 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 EML3Q32P44 896 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SLC10A6Q3KNW5 377 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 UAP1L1Q3KQV9 507 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 LINC00303Q3SY05 128 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 Q4G0T1 1027 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SEZ6Q53EL9 994 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 CCDC178Q5BJE1 867 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 XKR3Q5GH77 459 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 DGKKQ5KSL6 1271 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 PPM1LQ5SGD2 360 aa1.31□□□□□ -2.2
RNU4ATAC11P-201ENST00000515939 SDHAF4Q5VUM1 108 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms