RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 RNF39Q9H2S5 420 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 AVENQ9NQS1 362 aaPredicted RBP21.45■■□□□ 1.02
TRIO-223ENST00000515710 AMFRQ9UKV5 643 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 PCDHGC3Q9UN70 934 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 STXBP5LQ9Y2K9 1186 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 SQORQ9Y6N5 450 aa21.45■■□□□ 1.02
TRIO-223ENST00000515710 ZNF185O15231 689 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 MED7O43513 233 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 KIF4AO95239 1232 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 LSM8O95777 96 aaKnown RBP21.44■■□□□ 1.02
TRIO-223ENST00000515710 ZSCAN20P17040 1043 aaPredicted RBP21.44■■□□□ 1.02
TRIO-223ENST00000515710 ATF7P17544 494 aaPredicted RBP21.44■■□□□ 1.02
TRIO-223ENST00000515710 CDH8P55286 799 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 TRIM71Q2Q1W2 868 aaKnown RBP21.44■■□□□ 1.02
TRIO-223ENST00000515710 FBXO47Q5MNV8 452 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 CREG2Q8IUH2 290 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 TMEM130Q8N3G9 435 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 CAGE1Q8TC20 777 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 CPA5Q8WXQ8 436 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 CAPZA3Q96KX2 299 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 ZNF518BQ9C0D4 1074 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 ERVK-5Q9HDB9 667 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 CNOT8Q9UFF9 292 aaKnown RBP21.44■■□□□ 1.02
TRIO-223ENST00000515710 MYH10P35580 1976 aa21.44■■□□□ 1.02
TRIO-223ENST00000515710 CILPO75339 1184 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 TFRCP02786 760 aaKnown RBP21.43■■□□□ 1.02
TRIO-223ENST00000515710 RAP1GAPP47736 663 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 NT5DC3Q86UY8 548 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 PHF13Q86YI8 300 aaPredicted RBP21.43■■□□□ 1.02
TRIO-223ENST00000515710 USP38Q8NB14 1042 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 SLC43A3Q8NBI5 491 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 ANKRD7Q92527 254 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 RABGGTAQ92696 567 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 SMYD3Q9H7B4 428 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 FAM105AQ9NUU6 356 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 KLK14Q9P0G3 267 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 TUBGCP4Q9UGJ1 667 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 PAFAH1B1P43034 410 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 RAD23BP54727 409 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 ELF2Q15723 593 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 C9orf57Q5W0N0 161 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 C11orf63Q6NUN7 778 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 ZNF572Q7Z3I7 529 aaPredicted RBP21.43■■□□□ 1.02
TRIO-223ENST00000515710 COG1Q8WTW3 980 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 C18orf25Q96B23 403 aaPredicted RBP21.43■■□□□ 1.02
TRIO-223ENST00000515710 PBKQ96KB5 322 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 MMS19Q96T76 1030 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 SEZ6LQ9BYH1 1024 aa21.43■■□□□ 1.02
TRIO-223ENST00000515710 TRMT13Q9NUP7 481 aaKnown RBP21.43■■□□□ 1.02
TRIO-223ENST00000515710 BARX2Q9UMQ3 279 aaPredicted RBP21.43■■□□□ 1.02
TRIO-223ENST00000515710 CFHP08603 1231 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 BRD2P25440 801 aaKnown RBP21.42■■□□□ 1.02
TRIO-223ENST00000515710 INCA1Q0VD86 236 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 GLRA4Q5JXX5 417 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 TEX35Q5T0J7 233 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 LIN9Q5TKA1 542 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 MON1BQ7L1V2 547 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 TMEM35BQ8NCS4 154 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 ZNF564Q8TBZ8 553 aaPredicted RBP21.42■■□□□ 1.02
TRIO-223ENST00000515710 WHAMMQ8TF30 809 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 TMEM176AQ96HP8 235 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 BEGAINQ9BUH8 593 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 NUP85Q9BW27 656 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.42■■□□□ 1.02
TRIO-223ENST00000515710 AGO3Q9H9G7 860 aaKnown RBP21.42■■□□□ 1.02
TRIO-223ENST00000515710 STARD7Q9NQZ5 370 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 PADI3Q9ULW8 664 aa21.42■■□□□ 1.02
TRIO-223ENST00000515710 A0A0U1RQG5 324 aaPredicted RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 A0A1W2PQ45 241 aaPredicted RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 A0A1W2PQY0 241 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 FAM170AA1A519 330 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 PIRO00625 290 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 ITGA4P13612 1032 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 PNPLA4P41247 253 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 C1QBPQ07021 282 aaKnown RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 PAK2Q13177 524 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 CCDC181Q5TID7 509 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 PASD1Q8IV76 773 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 GPR161Q8N6U8 529 aaKnown RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 HES6Q96HZ4 224 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 TRAIPQ9BWF2 469 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 KIAA1257Q9ULG3 409 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 PACSIN2Q9UNF0 486 aaPredicted RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 PHF24Q9UPV7 400 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 CEP83Q9Y592 693 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 KBTBD13C9JR72 458 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 CXCR5P32302 372 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 CDH5P33151 784 aaPredicted RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 ITIH3Q06033 890 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 DMTNQ08495 405 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 CFAP221Q4G0U5 840 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 MRPL10Q7Z7H8 261 aaKnown RBP21.41■■□□□ 1.02
TRIO-223ENST00000515710 SLC4A11Q8NBS3 891 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 TFAP2BQ92481 460 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 ZNF560Q96MR9 790 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 RPS6KC1Q96S38 1066 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 PSMB7Q99436 277 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 LHX5Q9H2C1 402 aa21.41■■□□□ 1.02
TRIO-223ENST00000515710 GOLPH3Q9H4A6 298 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms