RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ZBED8Q8IZ13 594 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 NUP93Q8N1F7 819 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 OGFOD1Q8N543 542 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 KCTD17Q8N5Z5 321 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 KCNN1Q92952 543 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 PANX3Q96QZ0 392 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 TTC1Q99614 292 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 S100A14Q9HCY8 104 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 SAYSD1Q9NPB0 183 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 BARX2Q9UMQ3 279 aaPredicted RBP13.51□□□□□ -0.25
SMAD1-215ENST00000515385 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 DMTF1Q9Y222 760 aa13.51□□□□□ -0.25
SMAD1-215ENST00000515385 VILLO15195 856 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 ZNF862O60290 1169 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 FGFR1P11362 822 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 PLCB3Q01970 1234 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 CDK18Q07002 472 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 PDK3Q15120 406 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 TRIP13Q15645 432 aaPredicted RBP13.5□□□□□ -0.25
SMAD1-215ENST00000515385 ARHGAP44Q17R89 818 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 C1orf146Q5VVC0 180 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 BORAQ6PGQ7 559 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 ZNF804AQ7Z570 1209 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 ZNF276Q8N554 614 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 SAMD3Q8N6K7 520 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 REEP2Q9BRK0 252 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 KCNK13Q9HB14 408 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 OLFML3Q9NRN5 406 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 TAGLN3Q9UI15 199 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 UBE4BO95155 1302 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 MYO3BQ8WXR4 1341 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 TOGARAM1Q9Y4F4 1720 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
SMAD1-215ENST00000515385 ATP2A1O14983 1001 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 TBCAO75347 108 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 GCNT3O95395 438 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 DLDP09622 509 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CDK4P11802 303 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 GTF2H1P32780 548 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 ACADVLP49748 655 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CLK2P49760 499 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CETN1Q12798 172 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CCDC142Q17RM4 750 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 MMEL1Q495T6 779 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 PRUNE1Q86TP1 453 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 DDI1Q8WTU0 396 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 SLC20A1Q8WUM9 679 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 GAB3Q8WWW8 586 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 JADE3Q92613 823 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 ABTB1Q969K4 478 aaPredicted RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CORO1BQ9BR76 489 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 MRPS26Q9BYN8 205 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 Q9H521 79 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 VAT1LQ9HCJ6 419 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 ARHGEF4Q9NR80 690 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 FRMD4BQ9Y2L6 1034 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 hCG_2014768A0A024R1R8 64 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CAPN14A8MX76 684 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 WDR46O15213 610 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CLIC2O15247 247 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 KRT4P19013 534 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 PTP4A2Q12974 167 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 SPIDRQ14159 915 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 BTG3Q14201 252 aaPredicted RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 CLEC16AQ2KHT3 1053 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 PARP10Q53GL7 1025 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 EFHC2Q5JST6 749 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 SYDE2Q5VT97 1194 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 PCNX4Q63HM2 1172 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 UGT2A3Q6UWM9 527 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 RBM44Q6ZP01 1051 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 DYNLL2Q96FJ2 89 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 PWWP2AQ96N64 755 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 MAK16Q9BXY0 300 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 KCNK4Q9NYG8 393 aa13.49□□□□□ -0.25
SMAD1-215ENST00000515385 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.49□□□□□ -0.25
SMAD1-215ENST00000515385 RGL2O15211 777 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 P4HA2O15460 535 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 TGFB1I1O43294 461 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 LRRN2O75325 713 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 MED24O75448 989 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 CLPTM1O96005 669 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 ADRA1DP25100 572 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 ARL4CP56559 192 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 TBL3Q12788 808 aaKnown RBP13.48□□□□□ -0.25
SMAD1-215ENST00000515385 OVGP1Q12889 678 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 SUSD4Q5VX71 490 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 KLHDC10Q6PID8 442 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 USP17L2Q6R6M4 530 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 NCCRP1Q6ZVX7 275 aaPredicted RBP13.48□□□□□ -0.25
SMAD1-215ENST00000515385 RAPH1Q70E73 1250 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 FBXO33Q7Z6M2 555 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 NEDD1Q8NHV4 660 aa13.48□□□□□ -0.25
SMAD1-215ENST00000515385 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms