RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 MTRQ99707 1265 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 P2RY13Q9BPV8 354 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 ATXN3LQ9H3M9 355 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 C6orf50Q9HD87 102 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
SMAD5-210ENST00000515005 THG1LQ9NWX6 298 aaKnown RBP13.03□□□□□ -0.32
SMAD5-210ENST00000515005 SLC6A14Q9UN76 642 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 YIPF1Q9Y548 306 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
SMAD5-210ENST00000515005 MGAQ8IWI9 3026 aa13.02□□□□□ -0.32
SMAD5-210ENST00000515005 HELZP42694 1942 aaKnown RBP13.02□□□□□ -0.32
SMAD5-210ENST00000515005 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 ZBTB39O15060 712 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 MAP3K13O43283 966 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 KCNC4Q03721 635 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 RTN1Q16799 776 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 PFKFB3Q16875 520 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-210ENST00000515005 XKR9Q5GH70 373 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 TMPRSS7Q7RTY8 843 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 NOSTRINQ8IVI9 506 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 OLIG1Q8TAK6 271 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.33
SMAD5-210ENST00000515005 CAPN10Q9HC96 672 aa13.02□□□□□ -0.33
SMAD5-210ENST00000515005 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.33
SMAD5-210ENST00000515005 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-210ENST00000515005 APOBEC2Q9Y235 224 aaKnown RBP13.02□□□□□ -0.33
SMAD5-210ENST00000515005 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
SMAD5-210ENST00000515005 ANTXRLA6NF34 631 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 H7C4K7 107 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 CAPN9O14815 690 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 VNN2O95498 520 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 SERPINF2P08697 491 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 ARSAP15289 507 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
SMAD5-210ENST00000515005 USP11P51784 963 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 DUOXA1Q1HG43 343 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 Q4G0T1 1027 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 PEAR1Q5VY43 1037 aaPredicted RBP13.01□□□□□ -0.33
SMAD5-210ENST00000515005 LYSMD4Q5XG99 296 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 APOA5Q6Q788 366 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 PCSK4Q6UW60 755 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 TTC30AQ86WT1 665 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 MAFFQ9ULX9 164 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 GDAQ9Y2T3 454 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 STK24Q9Y6E0 443 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 COL12A1Q99715 3063 aa13.01□□□□□ -0.33
SMAD5-210ENST00000515005 ATMQ13315 3056 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
SMAD5-210ENST00000515005 ARHGAP33O14559 1287 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 SYN3O14994 580 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 TDP2O95551 362 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 GLRA2P23416 452 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 GABRR2P28476 465 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 WEE1P30291 646 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 P2RY2P41231 377 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 AMPD2Q01433 879 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
SMAD5-210ENST00000515005 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 SYNE3Q6ZMZ3 975 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 NAXDQ8IW45 347 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 ETNPPLQ8TBG4 499 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 UROC1Q96N76 676 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 NFKBIZQ9BYH8 718 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 CRISPLD1Q9H336 500 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 PDZD7Q9H5P4 517 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 TBX20Q9UMR3 447 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 USP20Q9Y2K6 914 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
SMAD5-210ENST00000515005 MUC22E2RYF6 1773 aaPredicted RBP12.99□□□□□ -0.33
SMAD5-210ENST00000515005 DOPEY2Q9Y3R5 2298 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 GJB3O75712 270 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
SMAD5-210ENST00000515005 HNRNPLP14866 589 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMAD5-210ENST00000515005 CPB1P15086 417 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 GNA11P29992 359 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 CDC27P30260 824 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 GJA4P35212 333 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 HOXD12P35452 270 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 ARL2P36404 184 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 DPP6P42658 865 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 EPHB3P54753 998 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 CYP4F8P98187 520 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 SLC14A1Q13336 389 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 CAMK2BQ13554 666 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 ARHGAP15Q53QZ3 475 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 DNAJB7Q7Z6W7 309 aaPredicted RBP12.99□□□□□ -0.33
SMAD5-210ENST00000515005 CEP76Q8TAP6 659 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 FCRL3Q96P31 734 aaPredicted RBP12.99□□□□□ -0.33
SMAD5-210ENST00000515005 PGLYRP2Q96PD5 576 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 TASP1Q9H6P5 420 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 KIAA1522Q9P206 1035 aaPredicted RBP12.99□□□□□ -0.33
SMAD5-210ENST00000515005 BRPF3Q9ULD4 1205 aa12.99□□□□□ -0.33
SMAD5-210ENST00000515005 RBM8AQ9Y5S9 174 aaKnown RBP12.99□□□□□ -0.33
SMAD5-210ENST00000515005 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMAD5-210ENST00000515005 CBFA2T3O75081 653 aa12.98□□□□□ -0.33
SMAD5-210ENST00000515005 DUSP4Q13115 394 aa12.98□□□□□ -0.33
SMAD5-210ENST00000515005 PLD1Q13393 1074 aa12.98□□□□□ -0.33
SMAD5-210ENST00000515005 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
SMAD5-210ENST00000515005 NBR1Q14596 966 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms