RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ZNF516Q92618 1163 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 CHFRQ96EP1 664 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 ZSCAN10Q96SZ4 725 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 MTRQ99707 1265 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 P2RY13Q9BPV8 354 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 ZDHHC5Q9C0B5 715 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 RNF41Q9H4P4 317 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 RIOX1Q9H6W3 641 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 CYP4F11Q9HBI6 524 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 AGO4Q9HCK5 861 aaKnown RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 OBP2AQ9NY56 170 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 CACNG4Q9UBN1 327 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 PLEKHB1Q9UF11 243 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 MAD2L2Q9UI95 211 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 IPPQ9Y573 584 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-229ENST00000513988 INSL5Q9Y5Q6 135 aa8.49□□□□□ -1.05
CLDND1-229ENST00000513988 NID2Q14112 1375 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 CEP192Q8TEP8 1941 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 CELSR2Q9HCU4 2923 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 KIAA1549LQ6ZVL6 1849 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 SPDYE3A6NKU9 549 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 FLRT2O43155 660 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 TNFSF14O43557 240 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 KIF4AO95239 1232 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 FGAP02671 866 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 TNFRSF8P28908 595 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 MCM2P49736 904 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 DNM2P50570 870 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 EPHA5P54756 1037 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 ZNF33AQ06730 810 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 MYO1EQ12965 1108 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 GRIK3Q13003 919 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 DRP2Q13474 957 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 SLC35G1Q2M3R5 365 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 TBC1D25Q3MII6 688 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 KIAA1614Q5VZ46 1190 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 TBC1D10CQ8IV04 446 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 TCEAL8Q8IYN2 117 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 CCDC26Q8TAB7 109 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 ZNF461Q8TAF7 563 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 NLRP4Q96MN2 994 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 LPIN3Q9BQK8 851 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 PAAF1Q9BRP4 392 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 GKN1Q9NS71 199 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 TM7SF3Q9NS93 570 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 TCEAL9Q9UHQ7 104 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 PLXND1Q9Y4D7 1925 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 NEDD4P46934 1319 aa8.48□□□□□ -1.05
CLDND1-229ENST00000513988 MTORP42345 2549 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 DNHD1Q96M86 4753 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 ABCA2Q9BZC7 2435 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 A0A1W2PRU2 124 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 IPO5O00410 1097 aaKnown RBP8.47□□□□□ -1.05
CLDND1-229ENST00000513988 HMMRO75330 724 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 ZNF883P0CG24 379 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 GNSP15586 552 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 ROR1Q01973 937 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 TARDBPQ13148 414 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLDND1-229ENST00000513988 CRY1Q16526 586 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 PTPRNQ16849 979 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 MAP7D1Q3KQU3 841 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 STXBP5Q5T5C0 1151 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 SLC36A4Q6YBV0 504 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 RHPN2Q8IUC4 686 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 FAM9BQ8IZU0 186 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 ENGASEQ8NFI3 743 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 SNRNP27Q8WVK2 155 aaKnown RBP8.47□□□□□ -1.05
CLDND1-229ENST00000513988 TSC1Q92574 1164 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 GPATCH3Q96I76 525 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 TBC1D32Q96NH3 1257 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
CLDND1-229ENST00000513988 FAM124BQ9H5Z6 455 aaPredicted RBP8.47□□□□□ -1.05
CLDND1-229ENST00000513988 GPRC5CQ9NQ84 441 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 NRBP2Q9NSY0 501 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 CEP72Q9P209 647 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 GABBR1Q9UBS5 961 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 SUSD2Q9UGT4 822 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 MMP17Q9ULZ9 603 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 GIT1Q9Y2X7 761 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 HES2Q9Y543 173 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 BACE2Q9Y5Z0 518 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 CRYBG3Q68DQ2 2970 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 MYO16Q9Y6X6 1858 aa8.47□□□□□ -1.05
CLDND1-229ENST00000513988 OTOL1A6NHN0 477 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 CASTOR2A6NHX0 329 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 SEC24AO95486 1093 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 CER1O95813 267 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 OATP04181 439 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PRKCBP05771 671 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PSAPP07602 524 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 ATF2P15336 505 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 FGFR3P22607 806 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 HOXA11P31270 313 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 ARPP19P56211 112 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
CLDND1-229ENST00000513988 PTH1RQ03431 593 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 TWF1Q12792 350 aa8.46□□□□□ -1.06
CLDND1-229ENST00000513988 TUSC3Q13454 348 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms