RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ZNF569Q5MCW4 686 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 GJB7Q6PEY0 223 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 TRIM72Q6ZMU5 477 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 DPH6Q7L8W6 267 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 MRPL10Q7Z7H8 261 aaKnown RBP10.58□□□□□ -0.72
TPM3-221ENST00000513769 CRIPAKQ8N1N5 446 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 ACRBPQ8NEB7 543 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
TPM3-221ENST00000513769 ZNF775Q96BV0 537 aaPredicted RBP10.58□□□□□ -0.72
TPM3-221ENST00000513769 ARMC5Q96C12 935 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 NOX5Q96PH1 765 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 ZNF518BQ9C0D4 1074 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 L2HGDHQ9H9P8 463 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 DPP3Q9NY33 737 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 GUCA1BQ9UMX6 200 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 ST3GAL5Q9UNP4 418 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 GINS2Q9Y248 185 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 CDY2AQ9Y6F7 541 aa10.58□□□□□ -0.72
TPM3-221ENST00000513769 KBTBD13C9JR72 458 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 DDX3XO00571 662 aaKnown RBP eCLIP10.57□□□□□ -0.72
TPM3-221ENST00000513769 CSDE1O75534 798 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 TMEM253P0C7T8 217 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 CXCL8P10145 99 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 HARSP12081 509 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 COL6A1P12109 1028 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 ACO1P21399 889 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 PNPLA4P41247 253 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 RAB27AP51159 221 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 HADHBP55084 474 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 NOP14P78316 857 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 MGAT3Q09327 533 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 TMEM62Q0P6H9 643 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 SEZ6Q53EL9 994 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 FAM47CQ5HY64 1035 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 ZNF667Q5HYK9 610 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 PAPD7Q5XG87 772 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 JADE1Q6IE81 842 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 RHOT2Q8IXI1 618 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 LRRC52Q8N7C0 313 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 BEST2Q8NFU1 509 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 CAGE1Q8TC20 777 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 ZNF668Q96K58 619 aaPredicted RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 ALS2CR12Q96Q35 445 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 SENP6Q9GZR1 1112 aaPredicted RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 NIF3L1Q9GZT8 377 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 LACRTQ9GZZ8 138 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 XYLT2Q9H1B5 865 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 RNF14Q9UBS8 474 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 UBQLN1Q9UMX0 589 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 NOD1Q9Y239 953 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 GIT1Q9Y2X7 761 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 NOC2LQ9Y3T9 749 aaKnown RBP10.57□□□□□ -0.72
TPM3-221ENST00000513769 NUB1Q9Y5A7 615 aa10.57□□□□□ -0.72
TPM3-221ENST00000513769 ZSWIM8A7E2V4 1837 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 CYP26A1O43174 497 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 LRRN2O75325 713 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 NPTXRO95502 500 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 EOMESO95936 686 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 PAEPP09466 180 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 MYBL1P10243 752 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 GTF2F1P35269 517 aaKnown RBP eCLIP10.56□□□□□ -0.72
TPM3-221ENST00000513769 THPOP40225 353 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 USP8P40818 1118 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 PDE6CP51160 858 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 WNT7BP56706 349 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 MYL6P60660 151 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 OSTNP61366 133 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 GPC5P78333 572 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 SKOR1P84550 965 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 UBXN11Q5T124 520 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 ACAD10Q6JQN1 1059 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 PARP9Q8IXQ6 854 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 EFCAB13Q8IY85 973 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 SYCE1Q8N0S2 351 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 C1orf127Q8N9H9 656 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
TPM3-221ENST00000513769 EPS8L1Q8TE68 723 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 TMEM40Q8WWA1 233 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 RSPH1Q8WYR4 309 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 DDX1Q92499 740 aaKnown RBP10.56□□□□□ -0.72
TPM3-221ENST00000513769 ZNF592Q92610 1267 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 TRIM11Q96F44 468 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 NAPGQ99747 312 aaPredicted RBP10.56□□□□□ -0.72
TPM3-221ENST00000513769 FTHL17Q9BXU8 183 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 BCO2Q9BYV7 579 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 MTMR12Q9C0I1 747 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.56□□□□□ -0.72
TPM3-221ENST00000513769 STARD7Q9NQZ5 370 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 SNTG2Q9NY99 539 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 LCMT1Q9UIC8 334 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 AJAP1Q9UKB5 411 aaPredicted RBP10.56□□□□□ -0.72
TPM3-221ENST00000513769 OGDHLQ9ULD0 1010 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 PIN4Q9Y237 131 aaKnown RBP10.56□□□□□ -0.72
TPM3-221ENST00000513769 PTPRJQ12913 1337 aa10.56□□□□□ -0.72
TPM3-221ENST00000513769 A0A0U1RQF3 1178 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms