RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 SLC8A2Q9UPR5 921 aa9.87□□□□□ -0.83
CAST-239ENST00000513666 USP20Q9Y2K6 914 aa9.87□□□□□ -0.83
CAST-239ENST00000513666 SMIM28A0A1B0GU29 152 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 A0A1W2PRU2 124 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 TAF4O00268 1085 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 PODXLO00592 558 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 ATG13O75143 517 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 XRCC6P12956 609 aaKnown RBP eCLIP9.86□□□□□ -0.83
CAST-239ENST00000513666 CSRP1P21291 193 aaKnown RBP9.86□□□□□ -0.83
CAST-239ENST00000513666 RPS6KB1P23443 525 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 ZNF280DQ6N043 979 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 MAEAQ7L5Y9 396 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 TMC8Q8IU68 726 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 ARID3BQ8IVW6 561 aaPredicted RBP9.86□□□□□ -0.83
CAST-239ENST00000513666 CAMKK1Q8N5S9 505 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 MCPH1Q8NEM0 835 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 PIGOQ8TEQ8 1089 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 BSNDQ8WZ55 320 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 ZFYVE19Q96K21 471 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 LRRC3BQ96PB8 259 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 TMEM209Q96SK2 561 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 SLC38A7Q9NVC3 462 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 KCNJ14Q9UNX9 436 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 YIPF1Q9Y548 306 aa9.86□□□□□ -0.83
CAST-239ENST00000513666 NUP205Q92621 2012 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 LNP1A1A4G5 178 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 BCLAF3A2AJT9 711 aaKnown RBP9.85□□□□□ -0.83
CAST-239ENST00000513666 RHOBTB1O94844 696 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 CAVIN2O95810 425 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 LIG1P18858 919 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 CREB5Q02930 508 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 PLD1Q13393 1074 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 ELF2Q15723 593 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 XKR4Q5GH76 650 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 STXBP5Q5T5C0 1151 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 ALKAL1Q6UXT8 129 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 RNF19BQ6ZMZ0 732 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 PIK3AP1Q6ZUJ8 805 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 GPIHBP1Q8IV16 184 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 SUSD3Q96L08 255 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 MKNK1Q9BUB5 465 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 PCDHA12Q9UN75 941 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 NEUROG3Q9Y4Z2 214 aa9.85□□□□□ -0.83
CAST-239ENST00000513666 A0A087WWV3 80 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 CPLX1O14810 134 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 CPB1P15086 417 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 ATP2B1P20020 1258 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 NAMPTP43490 491 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 TNK2Q07912 1038 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 KARSQ15046 597 aaKnown RBP9.84□□□□□ -0.83
CAST-239ENST00000513666 PTPAQ15257 358 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 ITPRIPL2Q3MIP1 535 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 TMEM196Q5HYL7 178 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 ATF7IP2Q5U623 682 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 FSTL4Q6MZW2 842 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 APBB1IPQ7Z5R6 666 aaPredicted RBP9.84□□□□□ -0.83
CAST-239ENST00000513666 APPL2Q8NEU8 664 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 BEST2Q8NFU1 509 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 DEPTORQ8TB45 409 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 KCTD12Q96CX2 325 aaKnown RBP9.84□□□□□ -0.83
CAST-239ENST00000513666 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 TMEM9BQ9NQ34 198 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 TOPORSQ9NS56 1045 aaPredicted RBP9.84□□□□□ -0.83
CAST-239ENST00000513666 TPCN1Q9ULQ1 816 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 SNX14Q9Y5W7 946 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 ATG2BQ96BY7 2078 aa9.84□□□□□ -0.83
CAST-239ENST00000513666 VNN2O95498 520 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 WEE1P30291 646 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 RPL9P32969 192 aaKnown RBP9.83□□□□□ -0.84
CAST-239ENST00000513666 GRM5P41594 1212 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 YARSP54577 528 aaKnown RBP9.83□□□□□ -0.84
CAST-239ENST00000513666 GRSF1Q12849 480 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAST-239ENST00000513666 BMP2KLQ5H9B9 411 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 NT5DC1Q5TFE4 455 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 GAREM2Q75VX8 874 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 BPIFB1Q8TDL5 484 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 DDX12PQ92771 950 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 ZMAT2Q96NC0 199 aaKnown RBP9.83□□□□□ -0.84
CAST-239ENST00000513666 HHIPQ96QV1 700 aa9.83□□□□□ -0.84
CAST-239ENST00000513666 CCDC94Q9BW85 323 aaPredicted RBP9.83□□□□□ -0.84
CAST-239ENST00000513666 TTC12Q9H892 705 aaPredicted RBP9.83□□□□□ -0.84
CAST-239ENST00000513666 CDX4O14627 284 aaPredicted RBP9.82□□□□□ -0.84
CAST-239ENST00000513666 TRDMT1O14717 391 aaKnown RBP9.82□□□□□ -0.84
CAST-239ENST00000513666 KHNYNO15037 678 aaKnown RBP9.82□□□□□ -0.84
CAST-239ENST00000513666 DCLK1O15075 740 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 RNF40O75150 1001 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 PRAMEF12O95522 483 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 FGF19O95750 216 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 KCNE1P15382 129 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 MCM4P33991 863 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 HSPA4P34932 840 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 MCM2P49736 904 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 EFNA5P52803 228 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 EPHB3P54753 998 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 TOB2Q14106 344 aaPredicted RBP9.82□□□□□ -0.84
CAST-239ENST00000513666 PPP2R5AQ15172 486 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 E2F4Q16254 413 aa9.82□□□□□ -0.84
CAST-239ENST00000513666 EARS2Q5JPH6 523 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms