RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 OR10T2Q8NGX3 314 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 SPATA18Q8TC71 538 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 PARD3BQ8TEW8 1205 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 SMG7Q92540 1137 aaKnown RBP10.48□□□□□ -0.73
RNF4-221ENST00000513643 GSDMAQ96QA5 445 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 PKMYT1Q99640 499 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 MTMR12Q9C0I1 747 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 CRISPLD1Q9H336 500 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 CHMP5Q9NZZ3 219 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 EPS15L1Q9UBC2 864 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 HSFX1Q9UBD0 423 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 DSEQ9UL01 958 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 NR2E1Q9Y466 385 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 ZDBF2Q9HCK1 2354 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 NOTCH4Q99466 2003 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 MYO10Q9HD67 2058 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 WDFY4Q6ZS81 3184 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 DENND4AQ7Z401 1863 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 DOCK8Q8NF50 2099 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 CYB561D2O14569 222 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 MAPK13O15264 365 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 GADD45BO75293 160 aaPredicted RBP10.47□□□□□ -0.73
RNF4-221ENST00000513643 CST3P01034 146 aaPredicted RBP10.47□□□□□ -0.73
RNF4-221ENST00000513643 ITGB3P05106 788 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 FAM163BP0C2L3 166 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 ODC1P11926 461 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 POLR2BP30876 1174 aaKnown RBP10.47□□□□□ -0.73
RNF4-221ENST00000513643 RBP5P82980 135 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 TFAMQ00059 246 aaKnown RBP10.47□□□□□ -0.73
RNF4-221ENST00000513643 ENPEPQ07075 957 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 C1orf220Q5T0J3 134 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 WSCD1Q658N2 575 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 OVOS1Q6IE37 1185 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 CENPPQ6IPU0 288 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 POTEHQ6S545 545 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 RNF19BQ6ZMZ0 732 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 CCDC149Q6ZUS6 474 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 DPH6Q7L8W6 267 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 OTOP3Q7RTS5 596 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 LRRTM3Q86VH5 581 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 ZC3H3Q8IXZ2 948 aaKnown RBP10.47□□□□□ -0.73
RNF4-221ENST00000513643 CSGALNACT2Q8N6G5 542 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 SLC7A14Q8TBB6 771 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 EDAQ92838 391 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 C1QTNF1Q9BXJ1 281 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 LRRC3Q9BY71 257 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 ZCWPW1Q9H0M4 648 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.47□□□□□ -0.73
RNF4-221ENST00000513643 DNMT3BQ9UBC3 853 aaKnown RBP10.47□□□□□ -0.73
RNF4-221ENST00000513643 MUTYHQ9UIF7 546 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 AGAP1Q9UPQ3 857 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 CLUHO75153 1309 aa10.47□□□□□ -0.73
RNF4-221ENST00000513643 C2orf16Q68DN1 1984 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 ANHXE9PGG2 379 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.73
RNF4-221ENST00000513643 MICAL2O94851 1124 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 C4BPAP04003 597 aaKnown RBP10.46□□□□□ -0.73
RNF4-221ENST00000513643 NR3C1P04150 777 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 CASP4P49662 377 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 CYP2J2P51589 502 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 EPHA5P54756 1037 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 ZXDAP98168 799 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 ADCY1Q08828 1119 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 PNOCQ13519 176 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 PTPN21Q16825 1174 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 SOWAHAQ2M3V2 549 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 SV2CQ496J9 727 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 PPM1LQ5SGD2 360 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 LIN9Q5TKA1 542 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 LMBRD2Q68DH5 695 aaPredicted RBP10.46□□□□□ -0.73
RNF4-221ENST00000513643 PDCL2Q8N4E4 241 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 TOP6BLQ8N6T0 577 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 RDH13Q8NBN7 331 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 TMC2Q8TDI7 906 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 MYADMQ96S97 322 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 TMEM209Q96SK2 561 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 CGRRF1Q99675 332 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 XYLT2Q9H1B5 865 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 CEP72Q9P209 647 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 L1RE1Q9UN81 338 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 INSL5Q9Y5Q6 135 aa10.46□□□□□ -0.73
RNF4-221ENST00000513643 MTMR11A4FU01 709 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 GOLGA6L4A6NEF3 574 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 LRRIQ3A6PVS8 624 aaPredicted RBP10.45□□□□□ -0.74
RNF4-221ENST00000513643 NRG2O14511 850 aaPredicted RBP10.45□□□□□ -0.74
RNF4-221ENST00000513643 IKBKBO14920 756 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 CCL16O15467 120 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 EXOC3O60645 756 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 XYLBO75191 536 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 MOSPD3O75425 235 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 AKAP3O75969 853 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 KIF20AO95235 890 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 OR4Q2P0C623 313 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 TMEM191BP0C7N4 346 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 LAMP2P13473 410 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms